RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 SMOC1Q9H4F8 434 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 EBF2Q9HAK2 575 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 GLOD4Q9HC38 313 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 AMACRQ9UHK6 382 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 RAB23Q9ULC3 237 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 CHKBQ9Y259 395 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 ZKSCAN5Q9Y2L8 839 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 FADS3Q9Y5Q0 445 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 ABCA7Q8IZY2 2146 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 BCLAF3A2AJT9 711 aaKnown RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 LMNAP02545 664 aaKnown RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 IGHV4-34P06331 123 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 SERPINF2P08697 491 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 KCNJ1P48048 391 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 SKOR1P84550 965 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 GRM3Q14832 879 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 OASLQ15646 514 aaKnown RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 SYT10Q6XYQ8 523 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 ASCL5Q7RTU5 278 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 RASGEF1CQ8N431 466 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 OR2T34Q8NGX1 318 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 IMP4Q96G21 291 aaKnown RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 PBKQ96KB5 322 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 WRAP53Q9BUR4 548 aaKnown RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 TDRD1Q9BXT4 1180 aaKnown RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 MIR1-1HGQ9H1L0 117 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 PCDH12Q9NPG4 1184 aa12.14□□□□□ -0.47
SYPL1-201ENST00000011473 EIF2B4Q9UI10 523 aaKnown RBP12.14□□□□□ -0.47
SYPL1-201ENST00000011473 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 LRRC72A6NJI9 287 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 MEI4A8MW99 385 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 MTSS1O43312 755 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 HTRA2O43464 458 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 PMPCBO75439 489 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 IFNB1P01574 187 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 PRLRP16471 622 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 CTPS1P17812 591 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 XPAP23025 273 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 FAM193AP78312 1265 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 SFSWAPQ12872 951 aaKnown RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ANKRD20A2Q5SQ80 823 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ANKRD20A1Q5TYW2 823 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ANKRD20A3Q5VUR7 823 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 LYSMD4Q5XG99 296 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 BRAT1Q6PJG6 821 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 DCLK2Q8N568 766 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 PRELID2Q8N945 189 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 GLIS1Q8NBF1 620 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 PIGKQ92643 395 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 OXNAD1Q96HP4 312 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 MYOCQ99972 504 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 SLC25A51Q9H1U9 297 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ARRDC1-AS1Q9H2J1 176 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 DKK3Q9UBP4 350 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 RSPH14Q9UHP6 348 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ZFR2Q9UPR6 939 aaKnown RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ZNF148Q9UQR1 794 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 CFAP54Q96N23 3096 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 UPK3BL1B0FP48 263 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 PATE3B3GLJ2 98 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 AREL1O15033 823 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 SLC7A4O43246 635 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 RNGTTO60942 597 aaKnown RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 SOCS5O75159 536 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 RHOBTB1O94844 696 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 PGLSO95336 258 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ALPIP09923 528 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ETS1P14921 441 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ETF1P62495 437 aaKnown RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 GALNT3Q14435 633 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ARMC12Q5T9G4 340 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 FAXCQ5TGI0 409 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
SYPL1-201ENST00000011473 KIAA0895LQ68EN5 471 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 LAYNQ6UX15 382 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 C11orf74Q86VG3 221 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 GORASP1Q9BQQ3 440 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 SEMA4AQ9H3S1 761 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 HAUS2Q9NVX0 235 aa12.13□□□□□ -0.47
SYPL1-201ENST00000011473 ZFHX2Q9C0A1 2572 aaPredicted RBP12.12□□□□□ -0.47
SYPL1-201ENST00000011473 TSPAN11A1L157 253 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 PGRMC1O00264 195 aaKnown RBP12.12□□□□□ -0.47
SYPL1-201ENST00000011473 FZD6O60353 706 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 MMP20O60882 483 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 CPP00450 1065 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 PRLP01236 227 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 ZSCAN5DPP0CG00 497 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 PSMB4P28070 264 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 OLIG2Q13516 323 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 CCNG2Q16589 344 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 HS1BP3Q53T59 392 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 KDM7AQ6ZMT4 941 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms