RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 CXorf40AQ8TE69 158 aa25.16■■□□□ 1.62
TSR3-201ENST00000007390 ECHDC3Q96DC8 303 aa25.16■■□□□ 1.62
TSR3-201ENST00000007390 CHP1Q99653 195 aa25.16■■□□□ 1.62
TSR3-201ENST00000007390 ENC1O14682 589 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 MAFKO60675 156 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 MMP20O60882 483 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 TM7SF2O76062 418 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 LDOC1O95751 146 aaPredicted RBP25.15■■□□□ 1.62
TSR3-201ENST00000007390 ITIH2P19823 946 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 HSPA9P38646 679 aaKnown RBP25.15■■□□□ 1.62
TSR3-201ENST00000007390 PFN3P60673 137 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 SLC10A7Q0GE19 358 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 TBX2Q13207 712 aaPredicted RBP25.15■■□□□ 1.62
TSR3-201ENST00000007390 ST3GAL2Q16842 350 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 CFAP58Q5T655 872 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 CENPTQ96BT3 561 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 CNDP2Q96KP4 475 aaKnown RBP25.15■■□□□ 1.62
TSR3-201ENST00000007390 CCDC42Q96M95 316 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 C1QTNF7Q9BXJ2 289 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 NHEJ1Q9H9Q4 299 aaPredicted RBP25.15■■□□□ 1.62
TSR3-201ENST00000007390 PCDH12Q9NPG4 1184 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 PCDHGA1Q9Y5H4 931 aa25.15■■□□□ 1.62
TSR3-201ENST00000007390 CACNA1BQ00975 2339 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 SPTY2D1-AS1A0A0U1RR47 76 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 SDC3O75056 442 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 CD48P09326 243 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 DGKAP23743 735 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 DPYSL3Q14195 570 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 ERAP2Q6P179 960 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 ZSWIM9Q86XI8 627 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 CPNE8Q86YQ8 564 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 LRRC49Q8IUZ0 686 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 ATPAF2Q8N5M1 289 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 SPOCK2Q92563 424 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 ZNF670Q9BS34 389 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 WRAP53Q9BUR4 548 aaKnown RBP25.14■■□□□ 1.62
TSR3-201ENST00000007390 ATP8A1Q9Y2Q0 1164 aa25.14■■□□□ 1.62
TSR3-201ENST00000007390 ARID1BQ8NFD5 2236 aaPredicted RBP25.13■■□□□ 1.61
TSR3-201ENST00000007390 TMEM8BA6NDV4 472 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 GOLGA8CPA6NN73 597 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 RIOK3O14730 519 aaKnown RBP25.13■■□□□ 1.61
TSR3-201ENST00000007390 KRT7P08729 469 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 MMP12P39900 470 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 BCL2L1Q07817 233 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 MMRN1Q13201 1228 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 FZD2Q14332 565 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 ZNF235Q14590 738 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 PDK2Q15119 407 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 TMPRSS7Q7RTY8 843 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 PARGQ86W56 976 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 SLC25A45Q8N413 288 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 SPTLC3Q9NUV7 552 aa25.13■■□□□ 1.61
TSR3-201ENST00000007390 AKR1B15C9JRZ8 316 aaPredicted RBP25.12■■□□□ 1.61
TSR3-201ENST00000007390 TOR1BO14657 336 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 PIAS2O75928 621 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 NME1P15531 152 aaKnown RBP25.12■■□□□ 1.61
TSR3-201ENST00000007390 CR2P20023 1033 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 IGFALSP35858 605 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 SCNN1BP51168 640 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 TAS2R40P59535 323 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 ATP13A4Q4VNC1 1196 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 CCNI2Q6ZMN8 369 aaPredicted RBP25.12■■□□□ 1.61
TSR3-201ENST00000007390 KDF1Q8NAX2 398 aaPredicted RBP25.12■■□□□ 1.61
TSR3-201ENST00000007390 TP53I13Q8NBR0 393 aaPredicted RBP25.12■■□□□ 1.61
TSR3-201ENST00000007390 MGME1Q9BQP7 344 aa25.12■■□□□ 1.61
TSR3-201ENST00000007390 FREM2Q5SZK8 3169 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.11■■□□□ 1.61
TSR3-201ENST00000007390 CFAP69A5D8W1 941 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 TRAFD1O14545 582 aaPredicted RBP25.11■■□□□ 1.61
TSR3-201ENST00000007390 MTA2O94776 668 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 CSF2P04141 144 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 C1SP09871 688 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 CDK4P11802 303 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 GJC1P36383 396 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 ACADVLP49748 655 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 HNRNPKP61978 463 aaKnown RBP eCLIP25.11■■□□□ 1.61
TSR3-201ENST00000007390 YPEL5P62699 121 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 ZNF211Q13398 564 aaPredicted RBP25.11■■□□□ 1.61
TSR3-201ENST00000007390 PDE1CQ14123 709 aaPredicted RBP25.11■■□□□ 1.61
TSR3-201ENST00000007390 PAFAH1B3Q15102 231 aaKnown RBP25.11■■□□□ 1.61
TSR3-201ENST00000007390 AGERQ15109 404 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 PROX2Q3B8N5 592 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 MAP7D3Q8IWC1 876 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 RHOT2Q8IXI1 618 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 BBS5Q8N3I7 341 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 KCTD6Q8NC69 237 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 PCDH19Q8TAB3 1148 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 SLC35G2Q8TBE7 412 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 FAF2Q96CS3 445 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 NSMCE3Q96MG7 304 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 NUDCD1Q96RS6 583 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 UCKL1Q9NWZ5 548 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 DNAJC28Q9NX36 388 aa25.11■■□□□ 1.61
TSR3-201ENST00000007390 MFSD11O43934 449 aa25.1■■□□□ 1.61
TSR3-201ENST00000007390 SOCS5O75159 536 aa25.1■■□□□ 1.61
TSR3-201ENST00000007390 C6P13671 934 aa25.1■■□□□ 1.61
TSR3-201ENST00000007390 ARHGAP25P42331 645 aa25.1■■□□□ 1.61
TSR3-201ENST00000007390 POLR2LP62875 67 aaKnown RBP25.1■■□□□ 1.61
TSR3-201ENST00000007390 GALNT2Q10471 571 aa25.1■■□□□ 1.61
TSR3-201ENST00000007390 SMAD1Q15797 465 aaKnown RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms