RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CTBSQ01459 385 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 FRG1Q14331 258 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 KLC3Q6P597 504 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 ANKRD49Q8WVL7 239 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 C3orf30Q96M34 536 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 DNAI2Q9GZS0 605 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 NDFIP2Q9NV92 336 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 SUCOQ9UBS9 1254 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 MYRFQ9Y2G1 1151 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 CD4P01730 458 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 CCDC166P0CW27 439 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 HSPA1AP0DMV8 641 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 HSPA1BP0DMV9 641 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 ATP5F1P24539 256 aaPredicted RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 STX5Q13190 355 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 DCTN2Q13561 401 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 KLHL35Q6PF15 583 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 ZBTB46Q86UZ6 589 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 FIBCD1Q8N539 461 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 DNAJB3Q8WWF6 145 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 RMND5BQ96G75 393 aaPredicted RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 ZNF560Q96MR9 790 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 MRPL57Q9BQC6 102 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 FBXO5Q9UKT4 447 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 TTC24A2A3L6 582 aaPredicted RBP14.13□□□□□ -0.15
USH1C-201ENST00000005226 ASB14A6NK59 587 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 NPHS1O60500 1241 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 SNRPB2P08579 225 aaKnown RBP14.13□□□□□ -0.15
USH1C-201ENST00000005226 LRPAP1P30533 357 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 HADHAP40939 763 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 RETREG3Q86VR2 466 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 ZNF786Q8N393 782 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 OSBPL11Q9BXB4 747 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 SPAG4Q9NPE6 437 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 UTP6Q9NYH9 597 aaKnown RBP14.13□□□□□ -0.15
USH1C-201ENST00000005226 CD300AQ9UGN4 299 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 CROTQ9UKG9 612 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 NUDT5Q9UKK9 219 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 SBF1O95248 1867 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 NCAM2O15394 837 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 CYP2C9P11712 490 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 CPB1P15086 417 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 SMPD1P17405 629 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 CHRM3P20309 590 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 ALDH3B2P48448 385 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 ENTPD1P49961 510 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 PRKAA2P54646 552 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 CAPRIN1Q14444 709 aaKnown RBP14.13□□□□□ -0.15
USH1C-201ENST00000005226 LPIN1Q14693 890 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 SV2CQ496J9 727 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 POTEHQ6S545 545 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 CYHR1Q6ZMK1 362 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 PIWIL4Q7Z3Z4 852 aaKnown RBP14.13□□□□□ -0.15
USH1C-201ENST00000005226 SPPL2CQ8IUH8 684 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 CLVS1Q8IUQ0 354 aaPredicted RBP14.13□□□□□ -0.15
USH1C-201ENST00000005226 CBR4Q8N4T8 237 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 PCED1BQ96HM7 432 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 HAUS8Q9BT25 410 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 BRD8Q9H0E9 1235 aa14.13□□□□□ -0.15
USH1C-201ENST00000005226 TCRBV3S1A0A5B6 114 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 LRRC14BA6NHZ5 514 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 BTBD19C9JJ37 291 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 NRP2O60462 931 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 COL6A2P12110 1019 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 SLC7A1P30825 629 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 CD151P48509 253 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 HK2P52789 917 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 CREB5Q02930 508 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 NHSL2Q5HYW2 709 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 BORAQ6PGQ7 559 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 DHFR2Q86XF0 187 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 FUNDC1Q8IVP5 155 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 KCTD13Q8WZ19 329 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 DPF3Q92784 378 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 NTAN1Q96AB6 310 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 SOX17Q9H6I2 414 aaPredicted RBP14.12□□□□□ -0.15
USH1C-201ENST00000005226 CNOT11Q9UKZ1 510 aaKnown RBP14.12□□□□□ -0.15
USH1C-201ENST00000005226 SUPT7LO94864 414 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 TFPTP0C1Z6 253 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 DARSP14868 501 aaKnown RBP14.12□□□□□ -0.15
USH1C-201ENST00000005226 CDK9P50750 372 aaKnown RBP14.12□□□□□ -0.15
USH1C-201ENST00000005226 SQLEQ14534 574 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 FAM83EQ2M2I3 478 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 ARL13BQ3SXY8 428 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 ANKDD1AQ495B1 522 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 NEPROQ6NW34 567 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 TAC4Q86UU9 113 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 FAM35AQ86V20 835 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 RYBPQ8N488 228 aaPredicted RBP14.12□□□□□ -0.15
USH1C-201ENST00000005226 PPHLN1Q8NEY8 458 aaKnown RBP14.12□□□□□ -0.15
USH1C-201ENST00000005226 ALG9Q9H6U8 611 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 TIMMDC1Q9NPL8 285 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 ARHGEF38Q9NXL2 777 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.12□□□□□ -0.15
USH1C-201ENST00000005226 DSEQ9UL01 958 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 CDC14AQ9UNH5 594 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 TRAF6Q9Y4K3 522 aa14.12□□□□□ -0.15
USH1C-201ENST00000005226 NR5A2O00482 541 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 SRP72O76094 671 aaKnown RBP14.11□□□□□ -0.15
USH1C-201ENST00000005226 ALDOCP09972 364 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms