RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gspt1Q8R050 636 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 DcxrQ91X52 244 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 AslQ91YI0 464 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Macrod1Q922B1 323 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sytl1Q99N80 567 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lrrc17Q9CXD9 443 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 KynuQ9CXF0 464 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nup210Q9QY81 1886 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Coro1bQ9WUM3 484 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ttll11A4Q9F4 727 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 SelenovD3YXG1 328 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp963D3Z2T8 383 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cxcr3O88410 367 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pde8aO88502 823 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Aff1O88573 1216 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ltb4rO88855 351 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Wfs1P56695 890 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cntn5P68500 1098 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ripply1Q2WG77 201 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Krt26Q3TRJ4 462 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Klhl23Q6GQU2 558 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm7247Q6UY52 187 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mtmr12Q80TA6 747 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rbbp5Q8BX09 538 aaKnown RBP10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Scara3Q8C850 606 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sirt5Q8K2C6 310 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Alg9Q8VDI9 611 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr371Q8VGB8 312 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 CrebzfQ91ZR3 358 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Atoh8Q99NA2 322 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 2010005H15RikQ9D8D6 97 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cacng3Q9JJV5 315 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Slc7a9Q9QXA6 487 aa10.02□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pias3O54714 628 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Olfm1O88998 485 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Pou5f1P20263 352 aaKnown RBP10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Sipa1P46062 1037 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Dsc3P55850 896 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 PhbP67778 272 aaKnown RBP10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Sult1d1Q3UZZ6 295 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Arl13bQ640N2 427 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Kansl1Q80TG1 1036 aaKnown RBP10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 C8bQ8BH35 589 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ube2q2Q8K2Z8 378 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Abhd8Q8R0P8 439 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Slxl1Q9D515 155 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Stk11Q9WTK7 436 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ddx39bQ9Z1N5 428 aaKnown RBP10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Serpinb3cA2RSF9 386 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ccdc24E9PUW8 296 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Spin2fJ3QPU0 254 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Adra1dP97714 562 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Olfr464Q5SW48 313 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Sdf4Q61112 361 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 AtminQ6P9S1 818 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Zfp438Q8BFX2 798 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tmtc3Q8BRH0 920 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tmem72Q8C3K5 275 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Adamts2Q8C9W3 1213 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Lrrc42Q8R2U7 421 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Wdr74Q8VCG3 384 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 MgarpQ8VI64 283 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Il1rl2Q9ERS7 574 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tmed2Q9R0Q3 201 aa10.02□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fignl2J3QK54 644 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Dusp8O09112 663 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 RelaQ04207 549 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Cdk16Q04735 496 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 1700061G19RikQ08EE8 705 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gpatch4Q3TFK5 415 aaKnown RBP10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Snx31Q6P8Y7 439 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tha1Q6XPS7 400 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Deup1Q7M6Y5 601 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Mettl21cQ8BLU2 248 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Lrrtm3Q8BZ81 582 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tmem120aQ8C1E7 343 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Nae1Q8VBW6 534 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Pglyrp2Q8VCS0 530 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Bag2Q91YN9 210 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Efcab9Q9DAM2 216 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Znf654Q9DAU9 571 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 MefvQ9JJ26 767 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ppm1dQ9QZ67 598 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Eml5Q8BQM8 1977 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Trbv4A0A075B5I2 113 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Klhl32A2AJX0 620 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Zfp758E9QAA1 583 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gm20671F6TVX7 576 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Arfip1G5E8V9 373 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Olfr694K7N641 315 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Rfc1P35601 1131 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Sox13Q04891 613 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 McuQ3UMR5 350 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Map3k10Q66L42 940 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Zfp759Q7M6X3 721 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Arl5aQ80ZU0 179 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Suds3Q8BR65 328 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 CherpQ8CGZ0 936 aaKnown RBP10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tasp1Q8R1G1 420 aa10.01□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Olfr45Q8VGM1 311 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms