RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 ThemisQ8BGW0 636 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Parp12Q8BZ20 711 aaKnown RBP9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mfsd6Q8CBH5 775 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cdan1Q8CC12 1239 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 H2-Q4Q8HWB2 354 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Prkd3Q8K1Y2 889 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Csde1Q91W50 798 aaKnown RBP9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Hps4Q99KG7 671 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mat2bQ99LB6 334 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 XpotQ9CRT8 963 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Atg7Q9D906 698 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 DiabloQ9JIQ3 237 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 SigirrQ9JLZ8 409 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ca5bQ9QZA0 317 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gipc2Q9Z2H7 314 aa9.81□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 AspgA0JNU3 564 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Prss40A6H6T1 365 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Akap5D3YVF0 745 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Vmn2r65G3X931 845 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Klk1b8P07628 261 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Csf3rP40223 837 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rps5P97461 204 aaKnown RBP9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slc22a23Q3UHH2 689 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Znf354cQ571J5 560 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Abcg1Q64343 666 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PtprcapQ64697 197 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fastkd5Q7TMV3 762 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rfx4Q7TNK1 735 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 ItpkcQ7TS72 678 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Aste1Q8BIR2 672 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ticam2Q8BJQ4 232 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rhpn2Q8BWR8 686 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cyp2d26Q8CIM7 500 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ebf4Q8K4J2 599 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cpa5Q8R4H4 436 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ndufs2Q91WD5 463 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Kif19Q99PT9 997 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Atp5f1Q9CQQ7 256 aaKnown RBP9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Nudt17Q9CWD3 296 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Q9CXL3 195 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slco1c1Q9ERB5 715 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ntn4Q9JI33 628 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 RalbQ9JIW9 206 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cpb1B2RS76 415 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm5478D3Z6R0 159 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Adcy1O88444 1118 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Usp53P15975 1069 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rhox5P52651 210 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Osbp2Q5QNQ6 908 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ei24Q61070 340 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Wnt8aQ64527 354 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fcrl5Q68SN8 596 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tfap2eQ6VUP9 442 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rps9Q6ZWN5 194 aaKnown RBP9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Serpinb9fQ80UK5 377 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slitrk5Q810B7 957 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Thnsl1Q8BH55 747 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Q8BL95 290 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ppwd1Q8CEC6 646 aaKnown RBP9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tmcc3Q8R310 477 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Smyd2Q8R5A0 433 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 DhrsxQ8VBZ0 335 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 MyocdQ8VIM5 935 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pskh1Q91YA2 424 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cpt1bQ924X2 772 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PglsQ9CQ60 257 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Josd2Q9CR30 188 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dus2Q9D7B1 493 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slc15a2Q9ES07 729 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tdp2Q9JJX7 370 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Homer2Q9QWW1 354 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cyb561d2Q9WUE3 222 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 ApipQ9WVQ5 241 aa9.8□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm36210A0A1B0GS00 229 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 TomtA1Y9I9 258 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ccdc120A2AEV7 629 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm12666A2AMD0 254 aaKnown RBP9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Syndig1A2ANU3 258 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Olfr1247A2AT78 314 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm3460E9QAI8 215 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mup2P11589 180 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pros1Q08761 675 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Q3KQP7 184 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PfplQ5RKV8 702 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Zbtb7bQ64321 544 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Atg16l2Q6KAU8 623 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pip5kl1Q6U7H8 395 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ostm1Q8BGT0 338 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mapkap1Q8BKH7 522 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fastkd3Q8BSN9 661 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Q8BWQ6 963 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ston2Q8BZ60 895 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ints10Q8K2A7 710 aaKnown RBP9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cd300ldQ8VCH2 221 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dhrs1Q99L04 313 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mrps5Q99N87 432 aaKnown RBP9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 AadacQ99PG0 398 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Shmt2Q9CZN7 504 aaKnown RBP9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Q9D5Q8 446 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Kbtbd12Q9D618 625 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms