RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 AxlQ00993 888 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Uba1Q02053 1058 aaKnown RBP12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Msx2Q03358 267 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Naaladl1Q7M758 745 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Parp9Q8CAS9 866 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pnpla8Q8K1N1 776 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ssx2ipQ8VC66 615 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tm4sf4Q91XD3 202 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rgs10Q9CQE5 181 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ndufaf7Q9CWG8 436 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Eef1akmt2Q9D853 244 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Fgf22Q9ESS2 162 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cngb3Q9JJZ9 694 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 CdylQ9WTK2 593 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Epm2aQ9WUA5 330 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Shroom3Q9QXN0 1986 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Lcn6A2AJB9 181 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pot1bH7BX60 640 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 BhmtO35490 407 aaKnown RBP12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 IkbkgO88522 412 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 P01644 108 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 P01645 108 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 P01646 108 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 P01647 108 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Dpy19l2P0CW70 773 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Il12bP43432 335 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 PrkcgP63318 697 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zyg11bQ3UFS0 744 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Sh3gl3Q62421 347 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Slc39a14Q75N73 489 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pcsk9Q80W65 694 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Stk32aQ8BGW6 398 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Nim1kQ8BHI9 436 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 R3hcc1lQ8BJM3 775 aaKnown RBP12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Clec1aQ8BWY2 269 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Peli3Q8BXR6 445 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Serpinb10Q8K1K6 397 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gsg1Q8R1W2 324 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Sgip1Q8VD37 806 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Lypd3Q91YK8 363 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rnft1Q9DCN7 395 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm8257E9Q8R3 264 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 AmacrO09174 381 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Per3O70361 1113 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 LtfP08071 707 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ifrd1P19182 449 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cd247P24161 164 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Aldh2P47738 519 aaKnown RBP12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ssxb3Q6XAS4 170 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ppp6r2Q8R3Q2 923 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Olfr1352Q8VGX5 309 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Oas1dQ8VI95 361 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Nsmce2Q91VT1 247 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tfap2dQ91ZK0 452 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Wbp11Q923D5 641 aaKnown RBP12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cdc26Q99JP4 85 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ifrd2Q9D8U0 441 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Chrnb2Q9ERK7 501 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Map2k5Q9WVS7 448 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Alpk2Q91ZB0 2144 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Eif2b3B1AUN2 452 aaKnown RBP12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 C6E9Q6D8 931 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Neu1O35657 409 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Odc1P00860 461 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rnf19aP50636 840 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Serpinb5P70124 375 aaKnown RBP12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Traf6P70196 530 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 ChpfQ6IQX7 774 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 AtminQ6P9S1 818 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Dnajc15Q78YY6 149 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Trerf1Q8BXJ2 1205 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Vps39Q8R5L3 886 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 LrgukQ9D5S7 820 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ddx59Q9DBN9 619 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pak1ip1Q9DCE5 382 aaKnown RBP12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 MkksQ9JI70 570 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Dclre1aQ9JIC3 1026 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Prmt1Q9JIF0 371 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Copg1Q9QZE5 874 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 H2afb2S4R1M3 115 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 RlfA2A7F4 1918 aa12.8□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Kcng1A2BDX4 514 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 2610008E11RikG3X964 669 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ikzf1Q03267 517 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Treml2Q2LA85 329 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Q32M26 199 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Agap2Q3UHD9 1186 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cyp2c66Q5GLZ0 490 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 PtprrQ62132 656 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 TwnkQ8CIW5 685 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Krt5Q922U2 580 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tspan11Q9D1D1 253 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 P2yr13Q9D8I2 337 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Efhc1Q9D9T8 648 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Il1rl2Q9ERS7 574 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ing2Q9ESK4 281 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Clcn5Q9WVD4 746 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm6370A0A0G2JGX9 315 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Mageb4A2A9R3 556 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Aldoart1A6ZI46 419 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms