RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Pcdhga9Q91XX9 932 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Sh3bp5lQ99LH9 392 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ift27Q9D0P8 186 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rsph14Q9D3W1 341 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cdk20Q9JHU3 346 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Egfl7Q9QXT5 275 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lypla2Q9WTL7 231 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fkbp9Q9Z247 570 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hecw2Q6I6G8 1578 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm3147A0A0J9YU88 481 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm10424A0A0J9YVD0 481 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fam209A2APA5 170 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slfn8B1ARD8 910 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ism2D3Z6A3 493 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pgbd1E9Q492 415 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm7971J3QMM8 481 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm8906L7N2A2 181 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tulp3O88413 460 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tcf3P15806 651 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tuba4aP68368 448 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 DsppP97399 934 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 AcadsQ07417 412 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zyg11bQ3UFS0 744 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Thoc7Q7TMY4 204 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr23Q7TRX4 325 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Trub1Q8C0D0 338 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 VcpkmtQ8C436 228 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rtp1Q8C8C1 263 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Smg8Q8VE18 991 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Eif2b2Q99LD9 351 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 RhojQ9ER71 214 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 D3Z070 196 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm2888K7N746 267 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mapk12O08911 367 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 MaffO54791 156 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Suv39h1O54864 412 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Chst3O88199 472 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nr4a1P12813 601 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Glb1P23780 647 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Grin2cQ01098 1239 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cntn3Q07409 1028 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Opa3Q505D7 179 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mks1Q5SW45 561 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 E2f5Q61502 335 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Serpina3aQ6P4P1 422 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rad9bQ6WBX7 403 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ssxb3Q6XAS4 170 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ing4Q8C0D7 249 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rcor1Q8CFE3 480 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 FktnQ8R507 461 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 FggQ8VCM7 436 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Acsf2Q8VCW8 615 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Msh4Q99MT2 958 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Syde1Q9DBZ9 737 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Abcb9Q9JJ59 762 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tfr2Q9JKX3 798 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr2Q9QWU6 327 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Epb41l1Q9Z2H5 879 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ndufaf6A2AIL4 333 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fam124aD3Z5V4 536 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rpl21O09167 160 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PtgisO35074 501 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 NfixP70257 488 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 TankP70347 448 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dnajb14Q149L6 379 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Alg10bQ3UGP8 474 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vps51Q3UVL4 782 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rab26Q504M8 260 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Clec12aQ504P2 267 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hsd3b5Q61694 373 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Itih2Q61703 946 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fndc11Q80WB0 326 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tmem169Q8BG50 297 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc9a7Q8BLV3 726 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mark4Q8CIP4 752 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fmo2Q8K2I3 535 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dcaf8Q8N7N5 591 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Necab2Q91ZP9 389 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mto1Q923Z3 669 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cab39lQ9DB16 337 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 DguokQ9QX60 277 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zfp985A2A7A5 519 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ptrhd1D3Z4S3 140 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm17175E9Q528 179 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Foxn2E9Q7L6 429 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hoxb6P09023 224 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hk1P17710 974 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Prim2P33610 505 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rab12P35283 243 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 CtskP55097 329 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Smpdl3bP58242 456 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gal3st3P61315 431 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rap1gap2Q5SVL6 712 aaKnown RBP9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zfp78Q5U406 512 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hist2h2abQ64522 130 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Arhgap11aQ80Y19 987 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Znf473Q8BI67 892 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Thap3Q8BJ25 218 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ankrd52Q8BTI7 1076 aa9.21□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Exosc4Q921I9 245 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms