RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Hkdc1Q91W97 915 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Prkag2Q91WG5 566 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pcdhb6Q91XZ4 772 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Fam83dQ9D7I8 585 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Scamp5Q9JKD3 235 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Slc23a1Q9Z2J0 605 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Znf536Q8K083 1302 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 TprnA2AI08 749 aaKnown RBP9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Rhox3cA2AWM0 215 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 BC024978J3QPC3 361 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Rhox3hL7MU37 215 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 En1P09065 401 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 PgrQ00175 926 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Rhox3aQ4TU90 215 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pla2g4dQ50L43 825 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Adora2aQ60613 410 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Kcna4Q61423 654 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cfap206Q6PE87 622 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 ItpkcQ7TS72 678 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Trnp1Q80ZI1 223 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Sec24bQ80ZX0 1251 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Arhgap25Q8BYW1 648 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Slco6c1Q8C0X7 706 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Slc22a19Q8VCA0 551 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Mospd1Q8VEL0 213 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Rnh1Q91VI7 456 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Fbxo32Q9CPU7 355 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 OoepQ9CWE6 164 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Hnrnpa0Q9CX86 305 aaKnown RBP9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Golgb1E9PVZ8 3238 aa9.54□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Atrnl1Q6A051 1378 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gm3259D3YUK0 475 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Slc6a13P31649 602 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Matn1P51942 500 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 1700061G19RikQ08EE8 705 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gm5800Q497L3 186 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Tp53i13Q5F267 385 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Mylk4Q5SUV5 386 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Slc5a10Q5SWY8 596 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Dlx3Q64205 287 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cyp3a13Q64464 503 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Olfr1105Q7TR58 312 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Nim1kQ8BHI9 436 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Kank2Q8BX02 843 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Hectd2Q8CDU6 774 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Slco1a5Q91YY5 670 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Itfg1Q99KW9 610 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 CenpsQ9D084 142 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 TcimQ9D915 106 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Tbc1d21Q9D9D3 336 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gpr45Q9EQQ4 373 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gpc1Q9QZF2 557 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Ttll9A2APC3 461 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Ism1A2ATD1 454 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 JhyE9Q793 770 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Dpysl2O08553 572 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 NumblO08919 604 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Got2P05202 430 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cd3gP11942 182 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Agtr2P35374 363 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 InaP46660 501 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pold1P52431 1105 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 SnnP61807 88 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Serpina3gQ5I2A0 440 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Trpv1Q704Y3 839 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Btnl1Q7TST0 509 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pgs1Q8BHF7 553 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Dyrk4Q8BI55 632 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Psd4Q8BLR5 1005 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Usp43Q8BUM9 1132 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Vps26bQ8C0E2 336 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 RtknQ8C6B2 564 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Nudt13Q8JZU0 352 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gspt1Q8R050 636 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Mrpl1Q99N96 336 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Trem2Q99NH8 227 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pmf1Q9CPV5 202 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Ltbp1Q8CG19 1712 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Olfr1022L7MTT3 315 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 RapsnP12672 412 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Vps45P97390 570 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Mc1rQ01727 315 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Ubxn2bQ0KL01 331 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Q3U4G0 281 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Stxbp5lQ5DQR4 1185 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Fbxw11Q5SRY7 542 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Tnfaip2Q61333 691 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Has1Q61647 583 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 MogQ61885 246 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Nomo1Q6GQT9 1214 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Ggnbp1Q6K1E7 370 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Tmem130Q6NXM3 419 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Stmnd1Q6P3A1 279 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Snx32Q80ZJ7 404 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 UnkQ8BL48 810 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Abraxas1Q8BPZ8 407 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Aph1bQ8C7N7 257 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 CtbsQ8R242 366 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Micu1Q8VCX5 477 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 NlnQ91YP2 704 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms