RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 KLF8O95600 359 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 ECEL1O95672 775 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 APODP05090 189 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 GLDCP23378 1020 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 RBL1P28749 1068 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 DGKGP49619 791 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 CLCN6P51797 869 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 GDF10P55107 478 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 MRPS25P82663 173 aaKnown RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 DR1Q01658 176 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 KDSRQ06136 332 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 IL10RBQ08334 325 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 SERINC3Q13530 473 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 DHX34Q14147 1143 aaKnown RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 MAP7D1Q3KQU3 841 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 FUT11Q495W5 492 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 PREPLQ4J6C6 727 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 PITRM1Q5JRX3 1037 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TEX35Q5T0J7 233 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 GRAMD4Q6IC98 578 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TIGD7Q6NT04 549 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 C8orf74Q6P047 294 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 NUDT18Q6ZVK8 323 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 GSTA5Q7RTV2 222 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TRMT11Q7Z4G4 463 aaKnown RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 LRRC49Q8IUZ0 686 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 ETFBKMTQ8IXQ9 262 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 MMGT1Q8N4V1 131 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 ALLCQ8N6M5 410 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 DCAF4L2Q8NA75 395 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 ATL2Q8NHH9 583 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 PIP4K2CQ8TBX8 421 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 GRK7Q8WTQ7 553 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 HTR3CQ8WXA8 447 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 LMLNQ96KR4 655 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TSGA13Q96PP4 275 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TMEM121Q9BTD3 319 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 ACE2Q9BYF1 805 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 SEPT10Q9P0V9 454 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 PCYOX1Q9UHG3 505 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 AMACRQ9UHK6 382 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 VPS51Q9UID3 782 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 OR51B4Q9Y5P0 310 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 SHROOM3Q8TF72 1996 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-228ENST00000641847 J3KR12 359 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 KCNK1O00180 336 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 RNF103O00237 685 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 CBX4O00257 560 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 TRIM24O15164 1050 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 TTI1O43156 1089 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 RAD51CO43502 376 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 KDELR3O43731 214 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 SNAP91O60641 907 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PRAMEF11O60813 436 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 NDUFS2O75306 463 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 TULP3O75386 442 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 C1QL1O75973 258 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 GAS8O95995 478 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 IFNB1P01574 187 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PABPC1P11940 636 aaKnown RBP9.54□□□□□ -0.88
PHGDH-228ENST00000641847 CCNCP24863 283 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 TIE1P35590 1138 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PTGIRP43119 386 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 SLC6A11P48066 632 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 IFI35P80217 286 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-228ENST00000641847 ARF5P84085 180 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 ZBTB17Q13105 803 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 SLC12A1Q13621 1099 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 KCTD19Q17RG1 926 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-228ENST00000641847 GEN1Q17RS7 908 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 WDR45BQ5MNZ6 344 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 LEKR1Q6ZMV7 388 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PRUNE1Q86TP1 453 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 JAMLQ86YT9 394 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 APCDD1Q8J025 514 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 AHI1Q8N157 1196 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF843Q8N446 348 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 FRMD1Q8N878 549 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 CCDC89Q8N998 374 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 FAM71DQ8N9W8 422 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 OR2I1PQ8NGU4 316 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 WFIKKN2Q8TEU8 576 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 NSMCE1Q8WV22 266 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 SLCO2A1Q92959 643 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 ALG14Q96F25 216 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PNKPQ96T60 521 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 FERMT1Q9BQL6 677 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 FEM1AQ9BSK4 669 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 C2orf49Q9BVC5 232 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-228ENST00000641847 CEP41Q9BYV8 373 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 CLMPQ9H6B4 373 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PDFQ9HBH1 243 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 USP29Q9HBJ7 922 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 DEC1Q9P2X7 70 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 FBXO10Q9UK96 956 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PCOLCE2Q9UKZ9 415 aa9.54□□□□□ -0.88
PHGDH-228ENST00000641847 HPCAL4Q9UM19 191 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms