RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ERP44Q9BS26 406 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 DPH5Q9H2P9 285 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 TMEM245Q9H330 911 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 NOD2Q9HC29 1040 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 FAM114A2Q9NRY5 505 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 UBP1Q9NZI7 540 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 MTRF1LQ9UGC7 380 aaKnown RBP13.1□□□□□ -0.31
PHGDH-218ENST00000641491 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
PHGDH-218ENST00000641491 RAI2Q9Y5P3 530 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 C5orf42Q9H799 3197 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 LEFTY1O75610 366 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 PEX11BO96011 259 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 ETS1P14921 441 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
PHGDH-218ENST00000641491 RPS9P46781 194 aaKnown RBP13.09□□□□□ -0.31
PHGDH-218ENST00000641491 CCR3P51677 355 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 CAV1Q03135 178 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 SLC14A2Q15849 920 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
PHGDH-218ENST00000641491 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 FBXL19Q6PCT2 694 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 BRAT1Q6PJG6 821 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 USP45Q70EL2 814 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
PHGDH-218ENST00000641491 OR2A12Q8NGT7 310 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 PIP4K2CQ8TBX8 421 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 HMGB4Q8WW32 186 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 SIPA1Q96FS4 1042 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 IMP4Q96G21 291 aaKnown RBP13.09□□□□□ -0.31
PHGDH-218ENST00000641491 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
PHGDH-218ENST00000641491 ACOX2Q99424 681 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 TBL1YQ9BQ87 522 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 FICDQ9BVA6 458 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 ETNK1Q9HBU6 452 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 SPATA6Q9NWH7 488 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-218ENST00000641491 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 SCML1Q9UN30 329 aa13.09□□□□□ -0.31
PHGDH-218ENST00000641491 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 CHURC1-FNTBB4DL54 471 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 WASH3PC4AMC7 463 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 DNALI1O14645 258 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 PIGNO95427 931 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 DCNP07585 359 aaKnown RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 CYP2A6P11509 494 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 ITIH2P19823 946 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 HLA-DPA1P20036 260 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 CDK16Q00536 496 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 ZBTB16Q05516 673 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 CDK18Q07002 472 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 SEMA5AQ13591 1074 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 LAMB3Q13751 1172 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 NCEH1Q6PIU2 408 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 Q6ZS52 159 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 SYT13Q7L8C5 426 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 KDELC2Q7Z4H8 507 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 SPEM1Q8N4L4 309 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 TMIEQ8NEW7 156 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 LPCAT1Q8NF37 534 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 FRS2Q8WU20 508 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 IFT81Q8WYA0 676 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 KLHL32Q96NJ5 620 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 LRRC1Q9BTT6 524 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 FRMD8Q9BZ67 464 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 CPEB1Q9BZB8 566 aaKnown RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 CHRDQ9H2X0 955 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 SUV39H2Q9H5I1 410 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 PRSS16Q9NQE7 514 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 EIF2B3Q9NR50 452 aaKnown RBP13.08□□□□□ -0.32
PHGDH-218ENST00000641491 FAM86C1Q9NVL1 165 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 SAMD15Q9P1V8 674 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 DOCK4Q8N1I0 1966 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 COL4A3Q01955 1670 aa13.08□□□□□ -0.32
PHGDH-218ENST00000641491 TTC24A2A3L6 582 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 MUSKO15146 869 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 LAMTOR5O43504 91 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 APBB3O95704 486 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 AP2A1O95782 977 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CD160O95971 181 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 MT-CYBP00156 380 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 FGF1P05230 155 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 TPSB2P20231 275 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 C5AR1P21730 350 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 PTGIRP43119 386 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 NEK3P51956 506 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 NRLP54845 237 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 WNT3AP56704 352 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 RPL26P61254 145 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 MRPS25P82663 173 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 SLC7A5Q01650 507 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CDH17Q12864 832 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CAMK2GQ13555 558 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CUL1Q13616 776 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms