RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 DGKAP23743 735 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 ARL4AP40617 200 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 DNAJC3Q13217 504 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 DPYSQ14117 519 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 SMAD1Q15797 465 aaKnown RBP25.5■■□□□ 1.67
VEGFA-230ENST00000640482 DPYSL2Q16555 572 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 LRRC73Q5JTD7 316 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 CFAP58Q5T655 872 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 DHRS13Q6UX07 377 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 ARHGAP12Q8IWW6 846 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 C1QTNF7Q9BXJ2 289 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 GPR27Q9NS67 375 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 IP6K2Q9UHH9 426 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 ANAPC7Q9UJX3 599 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 SPEGQ15772 3267 aa25.5■■□□□ 1.67
VEGFA-230ENST00000640482 KMT2BQ9UMN6 2715 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 A0A087X0T9 212 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 PIGNO95427 931 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 FAM228BP0C875 321 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 TIMP2P16035 220 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 IL1R2P27930 398 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 ACADVLP49748 655 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 IL10RBQ08334 325 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 ELP6Q0PNE2 266 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 RFTN1Q14699 578 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 SMTNL2Q2TAL5 461 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 ALKBH5Q6P6C2 394 aaKnown RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 NPWQ8N729 165 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 NIPA2Q8N8Q9 360 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 TSC1Q92574 1164 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 HSPH1Q92598 858 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 ZNF641Q96N77 438 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 TUBGCP5Q96RT8 1024 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 KLF6Q99612 283 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 NUP85Q9BW27 656 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 CINPQ9BW66 212 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 XPO4Q9C0E2 1151 aaKnown RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 SUV39H2Q9H5I1 410 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 DNAJC28Q9NX36 388 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 IPO11Q9UI26 975 aaKnown RBP25.49■■□□□ 1.67
VEGFA-230ENST00000640482 TRPM6Q9BX84 2022 aa25.49■■□□□ 1.67
VEGFA-230ENST00000640482 PIAS2O75928 621 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 TM7SF2O76062 418 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 CYP1A2P05177 515 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 CKMT2P17540 419 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 CASP14P31944 242 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 CSNK1DP48730 415 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 HNRNPKP61978 463 aaKnown RBP eCLIP25.48■■□□□ 1.678e-7■■■■□ 21.9
VEGFA-230ENST00000640482 ZNF211Q13398 564 aaPredicted RBP25.48■■□□□ 1.67
VEGFA-230ENST00000640482 CCDC122Q5T0U0 273 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 SLC25A45Q8N413 288 aa25.48■■□□□ 1.67
VEGFA-230ENST00000640482 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.48■■□□□ 1.67
VEGFA-230ENST00000640482 SPTY2D1-AS1A0A0U1RR47 76 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 TSPAN11A1L157 253 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 CBFA2T2O43439 604 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 MMP20O60882 483 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 ALPPL2P10696 532 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 ILKQ13418 452 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 BRAT1Q6PJG6 821 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 POLNQ7Z5Q5 900 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 PARGQ86W56 976 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 TMPRSS12Q86WS5 348 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 TSEN2Q8NCE0 465 aaKnown RBP25.47■■□□□ 1.67
VEGFA-230ENST00000640482 OR4C6Q8NH72 309 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 TEKT4Q8WW24 435 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 ATP13A3Q9H7F0 1226 aa25.47■■□□□ 1.67
VEGFA-230ENST00000640482 NEMP2A6NFY4 417 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 H3BM21 787 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 MYO1FO00160 1098 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 RARAP10276 462 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 TCF4P15884 667 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 PDE1CQ14123 709 aaPredicted RBP25.46■■□□□ 1.67
VEGFA-230ENST00000640482 FZD2Q14332 565 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 UGP2Q16851 508 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 PROX2Q3B8N5 592 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 TMEM52BQ4KMG9 183 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 ERAP2Q6P179 960 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 TMCO3Q6UWJ1 677 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 SRLQ86TD4 932 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 CENPTQ96BT3 561 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 BTBD6Q96KE9 485 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 WRAP53Q9BUR4 548 aaKnown RBP25.46■■□□□ 1.67
VEGFA-230ENST00000640482 CCDC86Q9H6F5 360 aaKnown RBP25.46■■□□□ 1.67
VEGFA-230ENST00000640482 UCKL1Q9NWZ5 548 aa25.46■■□□□ 1.67
VEGFA-230ENST00000640482 PTPRBP23467 1997 aa25.45■■□□□ 1.67
VEGFA-230ENST00000640482 CACNA1BQ00975 2339 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 TRIM38O00635 465 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 SIGLEC6O43699 453 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 CSF2P04141 144 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 ITIH2P19823 946 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 SERPINA4P29622 427 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 HNRNPH3P31942 346 aaKnown RBP25.45■■□□□ 1.66
VEGFA-230ENST00000640482 HNF1BP35680 557 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 RENBPP51606 427 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 PFN3P60673 137 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 NSUN2Q08J23 767 aaKnown RBP eCLIP25.45■■□□□ 1.66
VEGFA-230ENST00000640482 TRIM14Q14142 442 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 ZNF542PQ5EBM4 170 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 ARHGAP36Q6ZRI8 547 aa25.45■■□□□ 1.66
VEGFA-230ENST00000640482 ZNF599Q96NL3 588 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms