RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 DOCK4Q8N1I0 1966 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 DOCK8Q8NF50 2099 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 CTAGE15A4D2H0 777 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 FAM227AF5H4B4 570 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 EEF2KO00418 725 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 KIF1CO43896 1103 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CST8O60676 142 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 H2AFYO75367 372 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 SLU7O95391 586 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 ECEL1O95672 775 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CTAGE8P0CG41 777 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 IRF1P10914 325 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CORO1AP31146 461 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 AVPR1AP37288 418 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 HCAR3P49019 387 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 SLC11A2P49281 568 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 GFRA1P56159 465 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 TPI1P60174 286 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 DLX2Q07687 328 aaPredicted RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 AUHQ13825 339 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 TFDP2Q14188 446 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 MS4A13Q5J8X5 152 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 SLC9A4Q6AI14 798 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 RFX8Q6ZV50 586 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CTAGE6Q86UF2 777 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 RFX6Q8HWS3 928 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 DENND1CQ8IV53 801 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CTAGE4Q8IX94 777 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CMIPQ8IY22 773 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 ZNF683Q8IZ20 524 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 PRELID2Q8N945 189 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 MAIP1Q8WWC4 291 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 ING5Q8WYH8 240 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 AZIN2Q96A70 460 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 RPGRIP1Q96KN7 1286 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 UBXN10Q96LJ8 280 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 ZSWIM3Q96MP5 696 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 PRMT1Q99873 361 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 MAK16Q9BXY0 300 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 SMG9Q9H0W8 520 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 ABCG4Q9H172 646 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 ADAM7Q9H2U9 754 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 SLITRK6Q9H5Y7 841 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 RBM12Q9NTZ6 932 aaKnown RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 GPRC5BQ9NZH0 403 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CDH22Q9UJ99 828 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 ARHGAP26Q9UNA1 814 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 CRYL1Q9Y2S2 319 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 MAGED1Q9Y5V3 778 aaPredicted RBP8.15□□□□□ -1.11
SCARB2-220ENST00000640076 NUP205Q92621 2012 aa8.15□□□□□ -1.11
SCARB2-220ENST00000640076 GOLGA6L10A0A0M3HER8 536 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 E9PAM4 449 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 APOL1O14791 398 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 ACSL4O60488 711 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 PPM1BO75688 479 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 INMTO95050 263 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 PRAMEF12O95522 483 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 AMPD1P23109 780 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 EPHB2P29323 1055 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 HTR7P34969 479 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 LTBRP36941 435 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 STT3AP46977 705 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 TRPC1P48995 793 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 DYNLT1P63172 113 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 C2orf54Q08AI8 447 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 RAP1GAP2Q684P5 730 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 NADSYN1Q6IA69 706 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 Q6ZNB5 142 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 NPAS3Q8IXF0 933 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 IQCF2Q8IXL9 164 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 KRT78Q8N1N4 520 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 PLD5Q8N7P1 536 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-220ENST00000640076 USP13Q92995 863 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-220ENST00000640076 GAS2L1Q99501 681 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-220ENST00000640076 DCLK3Q9C098 648 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 S1PR5Q9H228 398 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 TIMMDC1Q9NPL8 285 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 TDP1Q9NUW8 608 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 ETNK2Q9NVF9 386 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 CLDND1Q9NY35 253 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 MARK1Q9P0L2 795 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 CFAP97Q9P2B7 532 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 STOML2Q9UJZ1 356 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 FBXO10Q9UK96 956 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 AGO1Q9UL18 857 aaKnown RBP8.14□□□□□ -1.11
SCARB2-220ENST00000640076 VANGL2Q9ULK5 521 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 SOX13Q9UN79 622 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 CCL26Q9Y258 94 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 R3HDM2Q9Y2K5 976 aaKnown RBP8.14□□□□□ -1.11
SCARB2-220ENST00000640076 SNX5Q9Y5X3 404 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 NUP210Q8TEM1 1887 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-220ENST00000640076 UNC80Q8N2C7 3258 aa8.14□□□□□ -1.11
SCARB2-220ENST00000640076 SPTBN5Q9NRC6 3674 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 IGLV3-10A0A075B6K4 115 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 GOLGA6L7A0A1B0GV03 622 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 CCDC188H7C350 402 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 APOC4-APOC2K7ER74 178 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 LEFTY2O00292 366 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 DCLK1O15075 740 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms