RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 FBXW8Q8N3Y1 598 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 DHRSXQ8N5I4 330 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 RP9Q8TA86 221 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 FAM45AQ8TCE6 357 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 ZNF317Q96PQ6 595 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 GATA5Q9BWX5 397 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 RNF208Q9H0X6 261 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 ZFP14Q9HCL3 533 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 PLK2Q9NYY3 685 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 NFS1Q9Y697 457 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 ABCC6O95255 1503 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 RGPD5Q99666 1765 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 SDK1Q7Z5N4 2213 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 KPNA3O00505 521 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 F7P08709 466 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 SLC5A3P53794 718 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 RIPK1Q13546 671 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 LPCAT4Q643R3 524 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 NECAB2Q7Z6G3 386 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 TAC4Q86UU9 113 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 CLVS1Q8IUQ0 354 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 MPP5Q8N3R9 675 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 SLCO2A1Q92959 643 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 GFM2Q969S9 779 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 TMEM159Q96B96 161 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 MIEF2Q96C03 454 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 MRPL9Q9BYD2 267 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 OSGEPL1Q9H4B0 414 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 AGO3Q9H9G7 860 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 TAS2R1Q9NYW7 299 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 CLIC5Q9NZA1 410 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 COL14A1Q05707 1796 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 LINC00032P0C843 101 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 KLRC2P26717 231 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 NUP107P57740 925 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 UBE3AQ05086 875 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 MSS51Q4VC12 460 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 LRRC49Q8IUZ0 686 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 DCBLD1Q8N8Z6 715 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 FBXO30Q8TB52 745 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 SPPL2AQ8TCT8 520 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 VPS33AQ96AX1 596 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 FIZ1Q96SL8 496 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 C2orf49Q9BVC5 232 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 VPS45Q9NRW7 570 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 SIN3BO75182 1162 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 DDX5P17844 614 aaKnown RBP14.52□□□□□ -0.08
SCARB2-216ENST00000639300 MAPK1P28482 360 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 S100A5P33763 92 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 TARBP2Q15633 366 aaKnown RBP14.52□□□□□ -0.08
SCARB2-216ENST00000639300 CRY1Q16526 586 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 ANKS3Q6ZW76 656 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 ITIH5Q86UX2 942 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 MAGEE2Q8TD90 523 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-216ENST00000639300 MCOLN3Q8TDD5 553 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 TBATAQ96M53 351 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 ASB2Q96Q27 587 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 ZNF395Q9H8N7 513 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-216ENST00000639300 TRAF6Q9Y4K3 522 aa14.52□□□□□ -0.08
SCARB2-216ENST00000639300 HNRNPRO43390 633 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 NELFEP18615 380 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 NMBRP28336 390 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 L1CAMP32004 1257 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 SLC7A2P52569 658 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 DAOAP59103 153 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 ENPEPQ07075 957 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 ARHGAP1Q07960 439 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 ZNF621Q6ZSS3 439 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 TRMT11Q7Z4G4 463 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 PATL1Q86TB9 770 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 NKAPQ8N5F7 415 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 B4GALNT2Q8NHY0 566 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 PLEKHA8Q96JA3 519 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 C7orf26Q96N11 449 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 TMPRSS4Q9NRS4 437 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 DDX28Q9NUL7 540 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 GMIPQ9P107 970 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 TRIM17Q9Y577 477 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 SCN11AQ9UI33 1791 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 CXorf49A8MYA2 514 aaPredicted RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 CD3EAPO15446 510 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 MAN1A2O60476 641 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 IGSF6O95976 241 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 PTPN3P26045 913 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 GRK4P32298 578 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 C1orf220Q5T0J3 134 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 RGMBQ6NW40 437 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 DENND6AQ8IWF6 608 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 MPP4Q96JB8 637 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 LENG8Q96PV6 779 aaPredicted RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 GPR88Q9GZN0 384 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 MYRFQ9Y2G1 1151 aa14.52□□□□□ -0.09
SCARB2-216ENST00000639300 ATXN2Q99700 1313 aaKnown RBP14.52□□□□□ -0.09
SCARB2-216ENST00000639300 NTRK1P04629 796 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 MSH3P20585 1137 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 ZIK1Q3SY52 487 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-216ENST00000639300 POM121L1PQ3SYA9 428 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 PRMT9Q6P2P2 845 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 TAS1R3Q7RTX0 852 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms