RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 MYO1FO00160 1098 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 ENC1O14682 589 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 AREL1O15033 823 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 RARAP10276 462 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 HNRNPH3P31942 346 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 GRM3Q14832 879 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 CFAP58Q5T655 872 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 TXNRD3NBQ6F5E7 133 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 KYAT3Q6YP21 454 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 ARHGAP36Q6ZRI8 547 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 LZTR1Q8N653 840 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 FAM174AQ8TBP5 190 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 BMFQ96LC9 184 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 C1QTNF2Q9BXJ5 285 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 KLHL11Q9NVR0 708 aa16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 IPO11Q9UI26 975 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-259ENST00000638114 KMT2BQ9UMN6 2715 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 FAM221BA6H8Z2 402 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 POM121BA6NF01 834 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 FPGTO14772 594 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 MMP20O60882 483 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 DKK1O94907 266 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 TPM1P09493 284 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 TIMP2P16035 220 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 ITIH2P19823 946 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 AMPD1P23109 780 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 SLC25A11Q02978 314 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 IL10RBQ08334 325 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 TMCO3Q6UWJ1 677 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 KANSL1Q7Z3B3 1105 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 POLNQ7Z5Q5 900 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 DCP2Q8IU60 420 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 TP53INP2Q8IXH6 220 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 SLC22A18ASQ8N1D0 253 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 TSEN2Q8NCE0 465 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 OR8K1Q8NGG5 319 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 ZNF564Q8TBZ8 553 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 CXorf40AQ8TE69 158 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 TEKT4Q8WW24 435 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 ASB12Q8WXK4 309 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 LENG8Q96PV6 779 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 CSPG4P5Q96PW8 444 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 WRAP53Q9BUR4 548 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 DEF6Q9H4E7 631 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 SUV39H2Q9H5I1 410 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 PCDH18Q9HCL0 1135 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 ETNK2Q9NVF9 386 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 ZNHIT6Q9NWK9 470 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 CTTNBP2NLQ9P2B4 639 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 NENFQ9UMX5 172 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 SPEGQ15772 3267 aa16.94■□□□□ 0.3
CACNA1A-259ENST00000638114 GJC1P36383 396 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 RABIFP47224 123 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 RGRP47804 291 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 ELP6Q0PNE2 266 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 DNAJC3Q13217 504 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 KRT81Q14533 505 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 RFTN1Q14699 578 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 SLC18A3Q16572 532 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 HADHQ16836 314 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 SRLQ86TD4 932 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 CAMK1DQ8IU85 385 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 VSTM4Q8IW00 320 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 PAF1Q8N7H5 531 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 DENND6BQ8NEG7 585 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 CTNNBL1Q8WYA6 563 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 ZNF641Q96N77 438 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 TUBGCP5Q96RT8 1024 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 KLF6Q99612 283 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 DNAJC7Q99615 494 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 ATP13A3Q9H7F0 1226 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 TDRD6O60522 2096 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 PTPRBP23467 1997 aa16.93■□□□□ 0.3
CACNA1A-259ENST00000638114 TSPAN11A1L157 253 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 TMEM8BA6NDV4 472 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 BUB1BO60566 1050 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 TM7SF2O76062 418 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 DGKAP23743 735 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 SERPINA4P29622 427 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 CSNK1DP48730 415 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 SUOXP51687 545 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 CDH6P55285 790 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 LBRQ14739 615 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 ZNF542PQ5EBM4 170 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 TMCO4Q5TGY1 634 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 BRAT1Q6PJG6 821 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 DHRS13Q6UX07 377 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 KDM7AQ6ZMT4 941 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 HCAR2Q8TDS4 363 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 C1QTNF7Q9BXJ2 289 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 PACSIN1Q9BY11 444 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 PCDH12Q9NPG4 1184 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 UCKL1Q9NWZ5 548 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 DNAJC28Q9NX36 388 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 SEPT3Q9UH03 358 aa16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 ARID1BQ8NFD5 2236 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-259ENST00000638114 SSU72P8A0A1W2PR75 194 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 FFAR2O15552 330 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 PIAS2O75928 621 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms