RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SRLQ86TD4 932 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 SLCO6A1Q86UG4 719 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 ARHGAP12Q8IWW6 846 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 EID2Q8N6I1 236 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 NPWQ8N729 165 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 BAHD1Q8TBE0 780 aaPredicted RBP13.97□□□□□ -0.17
PNKP-228ENST00000637325 CXorf40AQ8TE69 158 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 SAP25Q8TEE9 199 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 ADAMTS14Q8WXS8 1223 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 DNAJC7Q99615 494 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 UVRAGQ9P2Y5 699 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 DKK3Q9UBP4 350 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 IPO11Q9UI26 975 aaKnown RBP13.97□□□□□ -0.17
PNKP-228ENST00000637325 WASF3Q9UPY6 502 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 ITM2BQ9Y287 266 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 NEUROG3Q9Y4Z2 214 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 MYLKQ15746 1914 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 EPG5Q9HCE0 2579 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 SSU72P8A0A1W2PR75 194 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 FPGTO14772 594 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 LDOC1O95751 146 aaPredicted RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 TIMP2P16035 220 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 SERPINB6P35237 376 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 GJC1P36383 396 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 RENBPP51606 427 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 ADKP55263 362 aaKnown RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 ELP6Q0PNE2 266 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 FGL2Q14314 439 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 RFTN1Q14699 578 aaPredicted RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 ZFYVE27Q5T4F4 411 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 TXNRD3NBQ6F5E7 133 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 GCNT7Q6ZNI0 430 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 ARHGAP36Q6ZRI8 547 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 RAB44Q7Z6P3 723 aaPredicted RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 DCP2Q8IU60 420 aaKnown RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 TSEN2Q8NCE0 465 aaKnown RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 OR13H1Q8NG92 308 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 HCAR2Q8TDS4 363 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 NSMCE1Q8WV22 266 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 CNDP2Q96KP4 475 aaKnown RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 CCDC42Q96M95 316 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 ZNF641Q96N77 438 aaPredicted RBP13.96□□□□□ -0.17
PNKP-228ENST00000637325 CSPG4P5Q96PW8 444 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 C1QTNF7Q9BXJ2 289 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 C1QTNF2Q9BXJ5 285 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 SUV39H2Q9H5I1 410 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 ATP13A3Q9H7F0 1226 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 PCDH18Q9HCL0 1135 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 ABHD10Q9NUJ1 306 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 KLHL11Q9NVR0 708 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 SEPT3Q9UH03 358 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 LCMT1Q9UIC8 334 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 GGT7Q9UJ14 662 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 KLK13Q9UKR3 277 aa13.96□□□□□ -0.17
PNKP-228ENST00000637325 TMEM110-MUSTN1A8MSY1 372 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 ENC1O14682 589 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 MMP20O60882 483 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 SDC3O75056 442 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 TM7SF2O76062 418 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 SERPINA4P29622 427 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 CSNK1DP48730 415 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 SUOXP51687 545 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 SLC25A11Q02978 314 aaKnown RBP13.95□□□□□ -0.18
PNKP-228ENST00000637325 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
PNKP-228ENST00000637325 ST3GAL2Q16842 350 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 HS1BP3Q53T59 392 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 TMCO4Q5TGY1 634 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 ERAP2Q6P179 960 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 UNQ6494/PRO21346Q6UXR6 183 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 KYAT3Q6YP21 454 aaKnown RBP13.95□□□□□ -0.18
PNKP-228ENST00000637325 ABI3BPQ7Z7G0 1075 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 BBS5Q8N3I7 341 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 KCTD6Q8NC69 237 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 ASB12Q8WXK4 309 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 BMFQ96LC9 184 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 LENG8Q96PV6 779 aaPredicted RBP13.95□□□□□ -0.18
PNKP-228ENST00000637325 TUBGCP5Q96RT8 1024 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
PNKP-228ENST00000637325 PACSIN1Q9BY11 444 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 ETNK2Q9NVF9 386 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 NENFQ9UMX5 172 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 MSRB2Q9Y3D2 182 aa13.95□□□□□ -0.18
PNKP-228ENST00000637325 POM121BA6NF01 834 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 C1QTNF9BB2RNN3 333 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 AKR1B15C9JRZ8 316 aaPredicted RBP13.94□□□□□ -0.18
PNKP-228ENST00000637325 AREL1O15033 823 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 RAD51BO15315 384 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 BUB1BO60566 1050 aaPredicted RBP13.94□□□□□ -0.18
PNKP-228ENST00000637325 MFAP3LO75121 409 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 PROSCO94903 275 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 TMEM253P0C7T8 217 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 C1QTNF9P0C862 333 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 ITIH2P19823 946 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 RABIFP47224 123 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 SCNN1BP51168 640 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 BCL2L1Q07817 233 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 NSUN2Q08J23 767 aaKnown RBP eCLIP13.94□□□□□ -0.18
PNKP-228ENST00000637325 ZNF235Q14590 738 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 ASTE1Q2TB18 679 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms