RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 LEFTY2O00292 366 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 KLHL2O95198 593 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 FYNP06241 537 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 IRF1P10914 325 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 PFKLP17858 780 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 ATP5C1P36542 298 aaKnown RBP15.7■□□□□ 0.1
CLN8-209ENST00000635970 MAGEA6P43360 314 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 CLCN2P51788 898 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 NOMO1Q15155 1222 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 C1orf146Q5VVC0 180 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 FOXB2Q5VYV0 432 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 IZUMO2Q6UXV1 221 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 ACAD11Q709F0 780 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 SDCCAG8Q86SQ7 713 aaPredicted RBP15.7■□□□□ 0.1
CLN8-209ENST00000635970 ALYREFQ86V81 257 aaKnown RBP15.7■□□□□ 0.1
CLN8-209ENST00000635970 XYLT1Q86Y38 959 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 ST13P4Q8IZP2 240 aaPredicted RBP15.7■□□□□ 0.1
CLN8-209ENST00000635970 WBP2Q969T9 261 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 NXPE3Q969Y0 559 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 ASIC4Q96FT7 647 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 PANX3Q96QZ0 392 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 ZWILCHQ9H900 591 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 ABCC13Q9NSE7 274 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 THAP1Q9NVV9 213 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 SAE1Q9UBE0 346 aaPredicted RBP15.7■□□□□ 0.1
CLN8-209ENST00000635970 SLC7A8Q9UHI5 535 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 WASF2Q9Y6W5 498 aa15.7■□□□□ 0.1
CLN8-209ENST00000635970 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.7■□□□□ 0.1
CLN8-209ENST00000635970 ENDOD1O94919 500 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 NCAM1P13591 858 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 PSMC3P17980 439 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 IL1R2P27930 398 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 CRHR1P34998 444 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 GABRB2P47870 512 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 TEX44Q53QW1 395 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 PRPF39Q86UA1 669 aaKnown RBP15.69■□□□□ 0.1
CLN8-209ENST00000635970 TREML1Q86YW5 311 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 IGDCC3Q8IVU1 814 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 WDR75Q8IWA0 830 aaKnown RBP15.69■□□□□ 0.1
CLN8-209ENST00000635970 MFSD6LQ8IWD5 586 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 KBTBD2Q8IY47 623 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 BPIFB1Q8TDL5 484 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 RTP4Q96DX8 246 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 THTPAQ9BU02 230 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 ASNSD1Q9NWL6 643 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 ARMCX1Q9P291 453 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 TBC1D30Q9Y2I9 924 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 COMMD3-BMI1R4GMX3 469 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 MSI1O43347 362 aaKnown RBP15.69■□□□□ 0.1
CLN8-209ENST00000635970 C1QAP02745 245 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 GDI1P31150 447 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 SLC6A3Q01959 620 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 FCHO2Q0JRZ9 810 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 SYPL2Q5VXT5 272 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 DARS2Q6PI48 645 aaKnown RBP15.69■□□□□ 0.1
CLN8-209ENST00000635970 TIFABQ6ZNK6 161 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 CYS1Q717R9 158 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 ARFGAP1Q8N6T3 406 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 FAF2Q96CS3 445 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 SPATA16Q9BXB7 569 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 KLF16Q9BXK1 252 aaPredicted RBP15.69■□□□□ 0.1
CLN8-209ENST00000635970 OBP2AQ9NY56 170 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 CFAP97Q9P2B7 532 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 DNMT3LQ9UJW3 386 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 DUSP12Q9UNI6 340 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 TTLL3Q9Y4R7 772 aa15.69■□□□□ 0.1
CLN8-209ENST00000635970 MAP3K13O43283 966 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 BPGMP07738 259 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 HMBSP08397 361 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 GSTT1P30711 240 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 YWHAZP63104 245 aaKnown RBP15.68■□□□□ 0.1
CLN8-209ENST00000635970 PITX1P78337 314 aaPredicted RBP15.68■□□□□ 0.1
CLN8-209ENST00000635970 ASPHQ12797 758 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 CHI3L2Q15782 390 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 LIN52Q52LA3 116 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 IER5LQ5T953 404 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 FAM102AQ5T9C2 384 aaPredicted RBP15.68■□□□□ 0.1
CLN8-209ENST00000635970 KLHDC10Q6PID8 442 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 MCUQ8NE86 351 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 ADAM32Q8TC27 787 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 RNF139Q8WU17 664 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 FAM172AQ8WUF8 416 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 DEPDC1BQ8WUY9 529 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 TRMT61BQ9BVS5 477 aaKnown RBP15.68■□□□□ 0.1
CLN8-209ENST00000635970 POPDC2Q9HBU9 364 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 MARCH2Q9P0N8 246 aa15.68■□□□□ 0.1
CLN8-209ENST00000635970 HBS1LQ9Y450 684 aaKnown RBP15.68■□□□□ 0.1
CLN8-209ENST00000635970 SDR42E2A6NKP2 422 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 CCNT2O60583 730 aaKnown RBP15.67■□□□□ 0.1
CLN8-209ENST00000635970 RFPL1O75677 317 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 TRUB2O95900 331 aaKnown RBP15.67■□□□□ 0.1
CLN8-209ENST00000635970 SRFP11831 508 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 AQP5P55064 265 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 CDC16Q13042 620 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 STX3Q13277 289 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 SMTNL2Q2TAL5 461 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 HSF5Q4G112 596 aaPredicted RBP15.67■□□□□ 0.1
CLN8-209ENST00000635970 MAP7D3Q8IWC1 876 aa15.67■□□□□ 0.1
CLN8-209ENST00000635970 CTAGE3PQ8IX95 158 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms