RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 RHDQ02161 417 aa19.22■□□□□ 0.67
SMN2-215ENST00000628696 FAM172AQ8WUF8 416 aa19.22■□□□□ 0.67
SMN2-215ENST00000628696 GRAMD1AQ96CP6 724 aa19.22■□□□□ 0.67
SMN2-215ENST00000628696 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.22■□□□□ 0.67
SMN2-215ENST00000628696 WRAP53Q9BUR4 548 aaKnown RBP19.22■□□□□ 0.67
SMN2-215ENST00000628696 BOCQ9BWV1 1114 aa19.22■□□□□ 0.67
SMN2-215ENST00000628696 C1QTNF7Q9BXJ2 289 aa19.22■□□□□ 0.67
SMN2-215ENST00000628696 COL27A1Q8IZC6 1860 aaPredicted RBP19.22■□□□□ 0.67
SMN2-215ENST00000628696 A0A1W2PNU3 283 aaPredicted RBP19.21■□□□□ 0.67
SMN2-215ENST00000628696 RIOK3O14730 519 aaKnown RBP19.21■□□□□ 0.67
SMN2-215ENST00000628696 AREL1O15033 823 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 CASC3O15234 703 aaKnown RBP19.21■□□□□ 0.67
SMN2-215ENST00000628696 YY2O15391 372 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 TMCC1O94876 653 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 CYP1A1P04798 512 aaPredicted RBP19.21■□□□□ 0.67
SMN2-215ENST00000628696 CHRNB2P17787 502 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 EIF4A3P38919 411 aaKnown RBP19.21■□□□□ 0.67
SMN2-215ENST00000628696 PTPN9P43378 593 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 YPEL5P62699 121 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 FMO1Q01740 532 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 TCEA2Q15560 299 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 TCP11X2Q5H9J9 407 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 C6orf132Q5T0Z8 1188 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 STRADAQ7RTN6 431 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 SLC35F3Q8IY50 421 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 GDAP1L1Q96MZ0 367 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 SLC46A1Q96NT5 459 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 EPAS1Q99814 870 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 LRRC61Q9BV99 259 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 MBNL1Q9NR56 388 aaKnown RBP19.21■□□□□ 0.67
SMN2-215ENST00000628696 WDR70Q9NW82 654 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 GULP1Q9UBP9 304 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 PNMA8BQ9ULN7 279 aaPredicted RBP19.21■□□□□ 0.67
SMN2-215ENST00000628696 DOLKQ9UPQ8 538 aa19.21■□□□□ 0.67
SMN2-215ENST00000628696 LRRK1Q38SD2 2015 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 PMS2P1A4D2B8 440 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 ZSCAN5CA6NGD5 496 aaPredicted RBP19.2■□□□□ 0.66
SMN2-215ENST00000628696 LMO7DNF2Z398 122 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 LZTS3O60299 673 aaPredicted RBP19.2■□□□□ 0.66
SMN2-215ENST00000628696 IGSF6O95976 241 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 KRT3P12035 628 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 TIMP2P16035 220 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 TSHRP16473 764 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 XPAP23025 273 aaPredicted RBP19.2■□□□□ 0.66
SMN2-215ENST00000628696 KLK7P49862 253 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 HDAC4P56524 1084 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 POLR2FP61218 127 aaKnown RBP19.2■□□□□ 0.66
SMN2-215ENST00000628696 RHOAP61586 193 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 PPARDQ03181 441 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 KLHL40Q2TBA0 621 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 ESRP1Q6NXG1 681 aaKnown RBP19.2■□□□□ 0.66
SMN2-215ENST00000628696 NAT6Q93015 286 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 VOPP1Q96AW1 172 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 CCDC3Q9BQI4 270 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 TTYH3Q9C0H2 523 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 CLPBQ9H078 707 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 VPS16Q9H269 839 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 GANQ9H2C0 597 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 NLRC4Q9NPP4 1024 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 PADI4Q9UM07 663 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 NEU3Q9UQ49 428 aa19.2■□□□□ 0.66
SMN2-215ENST00000628696 CAPN8A6NHC0 703 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 TCEA3O75764 348 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 EEF1GP26641 437 aaKnown RBP19.19■□□□□ 0.66
SMN2-215ENST00000628696 RFC1P35251 1148 aaPredicted RBP19.19■□□□□ 0.66
SMN2-215ENST00000628696 SOX5P35711 763 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 VAC14Q08AM6 782 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 SPIDRQ14159 915 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 SCYL2Q6P3W7 929 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 IGF2-ASQ6U949 168 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 TRIM72Q6ZMU5 477 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 MACC1Q6ZN28 852 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 SLFN11Q7Z7L1 901 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 HID1Q8IV36 788 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 PYROXD2Q8N2H3 581 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 ARL14Q8N4G2 192 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 WDR36Q8NI36 951 aaKnown RBP19.19■□□□□ 0.66
SMN2-215ENST00000628696 CENPIQ92674 756 aaPredicted RBP19.19■□□□□ 0.66
SMN2-215ENST00000628696 CCDC97Q96F63 343 aaPredicted RBP19.19■□□□□ 0.66
SMN2-215ENST00000628696 SELENOOQ9BVL4 669 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 KLC2Q9H0B6 622 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 FAM207AQ9NSI2 230 aaPredicted RBP19.19■□□□□ 0.66
SMN2-215ENST00000628696 SIRPGQ9P1W8 387 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 COQ6Q9Y2Z9 468 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 PCDHGA8Q9Y5G5 932 aa19.19■□□□□ 0.66
SMN2-215ENST00000628696 COL6A6A6NMZ7 2263 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 ZNF462Q96JM2 2506 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 INSIG1O15503 277 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 TNFSF15O95150 251 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 CELA2BP08218 269 aaPredicted RBP19.18■□□□□ 0.66
SMN2-215ENST00000628696 CTSEP14091 401 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 GPD1P21695 349 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 EPHB2P29323 1055 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 LY6DQ14210 128 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 IRF4Q15306 451 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 RD3Q7Z3Z2 195 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 TP53I13Q8NBR0 393 aaPredicted RBP19.18■□□□□ 0.66
SMN2-215ENST00000628696 CASKIN2Q8WXE0 1202 aa19.18■□□□□ 0.66
SMN2-215ENST00000628696 TSACCQ96A04 125 aaPredicted RBP19.18■□□□□ 0.66
SMN2-215ENST00000628696 NTAN1Q96AB6 310 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms