RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 AMACRQ9UHK6 382 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 ATXN2Q99700 1313 aaKnown RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 RNF103O00237 685 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 PGRMC1O00264 195 aaKnown RBP14.89□□□□□ -0.03
PNKP-221ENST00000627317 KPNA3O00505 521 aaPredicted RBP14.89□□□□□ -0.03
PNKP-221ENST00000627317 CES2O00748 559 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 MUSKO15146 869 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 MID1O15344 667 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 LEFTY1O75610 366 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 STK10O94804 968 aaKnown RBP14.89□□□□□ -0.03
PNKP-221ENST00000627317 HLA-DQB2P05538 268 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 CD6P30203 668 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 MAPK8P45983 427 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 RGRP47804 291 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 MAXP61244 160 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 AP1S1P61966 158 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 SFSWAPQ12872 951 aaKnown RBP14.89□□□□□ -0.03
PNKP-221ENST00000627317 ZBTB17Q13105 803 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 MYLK3Q32MK0 819 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 POM121L1PQ3SYA9 428 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 ARSIQ5FYB1 569 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 PAPD7Q5XG87 772 aaKnown RBP14.89□□□□□ -0.03
PNKP-221ENST00000627317 SYT10Q6XYQ8 523 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 DGLUCYQ7Z3D6 616 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 SRLQ86TD4 932 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 RASGEF1CQ8N431 466 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 COG1Q8WTW3 980 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 HTR3CQ8WXA8 447 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 PIGKQ92643 395 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 TOE1Q96GM8 510 aaKnown RBP14.89□□□□□ -0.03
PNKP-221ENST00000627317 PPP1R16AQ96I34 528 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 MS4A14Q96JA4 679 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 HSPA12BQ96MM6 686 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 CEP41Q9BYV8 373 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 PABPC3Q9H361 631 aaKnown RBP14.89□□□□□ -0.03
PNKP-221ENST00000627317 SCUBE2Q9NQ36 999 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 DYRK4Q9NR20 520 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 SCML1Q9UN30 329 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 WASF2Q9Y6W5 498 aa14.89□□□□□ -0.03
PNKP-221ENST00000627317 C10orf142B7Z368 130 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 INSIG1O15503 277 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 KCNN4O15554 427 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 UGT2B4P06133 528 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 CTSLP07711 333 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 C5AR1P21730 350 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 PTPN3P26045 913 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 RBL1P28749 1068 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 GKP32189 559 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 SLC8A1P32418 973 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 DPP6P42658 865 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 CSNK1DP48730 415 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 SCNN1BP51168 640 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 IRX4P78413 519 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 NSUN2Q08J23 767 aaKnown RBP eCLIP14.88□□□□□ -0.03
PNKP-221ENST00000627317 GRM3Q14832 879 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 CFAP58Q5T655 872 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 STPG1Q5TH74 334 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 NYAP1Q6ZVC0 841 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 PGBD5Q8N414 524 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.88□□□□□ -0.03
PNKP-221ENST00000627317 DEFB119Q8N690 84 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 PAF1Q8N7H5 531 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 TMIEQ8NEW7 156 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 CADM4Q8NFZ8 388 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 C1orf54Q8WWF1 131 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 LRIG1Q96JA1 1093 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 AGAP3Q96P47 875 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 NUDCD1Q96RS6 583 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 IL12RB2Q99665 862 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 OMDQ99983 421 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 EDEM2Q9BV94 578 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 OSBPL1AQ9BXW6 950 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 ATP13A3Q9H7F0 1226 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 CAPN10Q9HC96 672 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 KLHL8Q9P2G9 620 aaPredicted RBP14.88□□□□□ -0.03
PNKP-221ENST00000627317 SARDHQ9UL12 918 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 DNPEPQ9ULA0 475 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 PPM1HQ9ULR3 514 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 TTC7AQ9ULT0 858 aaPredicted RBP14.88□□□□□ -0.03
PNKP-221ENST00000627317 SAR1BQ9Y6B6 198 aa14.88□□□□□ -0.03
PNKP-221ENST00000627317 MED19A0JLT2 244 aaPredicted RBP14.87□□□□□ -0.03
PNKP-221ENST00000627317 CFAP69A5D8W1 941 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 CDX4O14627 284 aaPredicted RBP14.87□□□□□ -0.03
PNKP-221ENST00000627317 KHNYNO15037 678 aaKnown RBP14.87□□□□□ -0.03
PNKP-221ENST00000627317 ZNF185O15231 689 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 LIASO43766 372 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 RNASEH2AO75792 299 aaKnown RBP14.87□□□□□ -0.03
PNKP-221ENST00000627317 PRLRP16471 622 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 SERPINA4P29622 427 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 FOXK2Q01167 660 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 SNX1Q13596 522 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 TEX44Q53QW1 395 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 RALGPS1Q5JS13 557 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 SLC23A3Q6PIS1 610 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 GDPD4Q6W3E5 623 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 ZSCAN30Q86W11 494 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 HDDC3Q8N4P3 179 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 SLC35B2Q8TB61 432 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 ACTRT1Q8TDG2 376 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 DNASE2BQ8WZ79 361 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms