RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 DNAJC21Q5F1R6 531 aaKnown RBP18■□□□□ 0.47
PTCHD3-202ENST00000622555 TMEM196Q5HYL7 178 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 EMC10Q5UCC4 262 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 FSTL4Q6MZW2 842 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 TPRG1Q6ZUI0 275 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 SLC25A41Q8N5S1 370 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 OR2A12Q8NGT7 310 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 EZH1Q92800 747 aaPredicted RBP18■□□□□ 0.47
PTCHD3-202ENST00000622555 CAVIN3Q969G5 261 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 MSANTD3Q96H12 275 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 FEM1CQ96JP0 617 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 ZDHHC6Q9H6R6 413 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 ZDHHC4Q9NPG8 344 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 CASS4Q9NQ75 786 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 HCN2Q9UL51 889 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 SORCS3Q9UPU3 1222 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 STARD13Q9Y3M8 1113 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 POP4O95707 220 aaKnown RBP17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 EGFP01133 1207 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 CA4P22748 312 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 RAD51Q06609 339 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 BCL2L1Q07817 233 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 CDH17Q12864 832 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 TRAF2Q12933 501 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 SLMAPQ14BN4 828 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 HP1BP3Q5SSJ5 553 aaPredicted RBP17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 RANBP10Q6VN20 620 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 TMC3Q7Z5M5 1100 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 CAMK1DQ8IU85 385 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 PLPP6Q8IY26 295 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 ZNF513Q8N8E2 541 aaPredicted RBP17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 CHST14Q8NCH0 376 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 PDCD6IPQ8WUM4 868 aaKnown RBP17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 PTPRN2Q92932 1015 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 TDRD1Q9BXT4 1180 aaKnown RBP17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 ATP13A3Q9H7F0 1226 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 CHKBQ9Y259 395 aa17.99■□□□□ 0.47
PTCHD3-202ENST00000622555 EDDM13A0A1B0GTR0 161 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 C19orf67A6NJJ6 358 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 EIF3HO15372 352 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 PIGNO95427 931 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 HNRNPLP14866 589 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 DRD1P21728 446 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 IL12RB1P42701 662 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 MAGEA3P43357 314 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 CHRNA4P43681 627 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 E2F5Q15329 346 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 HNRNPA1L2Q32P51 320 aaKnown RBP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 ZBED8Q8IZ13 594 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 FAM3CQ92520 227 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 TUBGCP5Q96RT8 1024 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 ACOX2Q99424 681 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 PHACTR1Q9C0D0 580 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 TMEM245Q9H330 911 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 VIPAS39Q9H9C1 493 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 CACNA2D2Q9NY47 1150 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 MYLKQ15746 1914 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 LOC285095A0A1B0GVY8 99 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 WASH3PC4AMC7 463 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 E7ESA3 106 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 AP3B1O00203 1094 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 EPOP01588 193 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 PRKCHP24723 683 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 MGAT1P26572 445 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 SERPINA4P29622 427 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 TIE1P35590 1138 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 KIR2DL1P43626 348 aaPredicted RBP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 GALNT3Q14435 633 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 CASP8Q14790 479 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 FASTKD3Q14CZ7 662 aaKnown RBP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 SLC1A5Q15758 541 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 MLF2Q15773 248 aaPredicted RBP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 SIRPB2Q5JXA9 342 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 DENND5AQ6IQ26 1287 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 ANKMY2Q8IV38 441 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 CHPFQ8IZ52 775 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 PAF1Q8N7H5 531 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 GRIN3AQ8TCU5 1115 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 ATXN2LQ8WWM7 1075 aaKnown RBP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 TRIB3Q96RU7 358 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 HEPHQ9BQS7 1158 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 CPEB1Q9BZB8 566 aaKnown RBP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 BFARQ9NZS9 450 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 CA14Q9ULX7 337 aa17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 ARIH1Q9Y4X5 557 aaPredicted RBP17.98■□□□□ 0.47
PTCHD3-202ENST00000622555 NDST3O95803 873 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 ATXN1LP0C7T5 689 aaKnown RBP17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 TPH1P17752 444 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 HLA-DPA1P20036 260 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 MAGEA4P43358 317 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 GRM3Q14832 879 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 ADGRE3Q9BY15 652 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 TXLNGYQ9BZA5 131 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 ARNT2Q9HBZ2 717 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 CHMP2BQ9UQN3 213 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 STON1Q9Y6Q2 735 aa17.97■□□□□ 0.47
PTCHD3-202ENST00000622555 CKAP5Q14008 2032 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 SDR42E2A6NKP2 422 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 MAN2B1O00754 1011 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms