RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 ATP1A2P50993 1020 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 AP1S1P61966 158 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 LAMB3Q13751 1172 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 FRG1Q14331 258 aaKnown RBP16.72■□□□□ 0.27
PCGF3-213ENST00000620529 ASTLQ6HA08 431 aaPredicted RBP16.72■□□□□ 0.27
PCGF3-213ENST00000620529 NCEH1Q6PIU2 408 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 SRRM1Q8IYB3 904 aaKnown RBP16.72■□□□□ 0.27
PCGF3-213ENST00000620529 FCRL3Q96P31 734 aaPredicted RBP16.72■□□□□ 0.27
PCGF3-213ENST00000620529 RANBP9Q96S59 729 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 TDRD1Q9BXT4 1180 aaKnown RBP16.72■□□□□ 0.27
PCGF3-213ENST00000620529 SMYD2Q9NRG4 433 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 CLEC1BQ9P126 229 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 TXNDC16Q9P2K2 825 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 ZNF180Q9UJW8 692 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 ACTL7BQ9Y614 415 aa16.72■□□□□ 0.27
PCGF3-213ENST00000620529 KIF26AQ9ULI4 1882 aaPredicted RBP16.72■□□□□ 0.27
PCGF3-213ENST00000620529 ZCWPW2A0A1B0GU75 182 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 CCDC78A2IDD5 438 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 HOXC11O43248 304 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 IGSF6O95976 241 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 POLR2EP19388 210 aaKnown RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 GBP2P32456 591 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 MAPK8P45983 427 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 GALNT3Q14435 633 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 LRIT3Q3SXY7 679 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 ATXN7L2Q5T6C5 722 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 MARK2Q7KZI7 788 aaKnown RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 SRLQ86TD4 932 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 UNC5BQ8IZJ1 945 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 RMDN1Q96DB5 314 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 RPL10LQ96L21 214 aaKnown RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 ADGRE3Q9BY15 652 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 CNOT10Q9H9A5 744 aaKnown RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 C20orf96Q9NUD7 363 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 PRKAG3Q9UGI9 489 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 CHKBQ9Y259 395 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 RAI2Q9Y5P3 530 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 TMEM265A0A087WTH1 108 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 TNRC18O15417 2968 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 SMAD6O43541 496 aaKnown RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 TBX10O75333 385 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 KRT37O76014 449 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 ERVK-10P10266 1014 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 ALADP13716 330 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 MTHFRP42898 656 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 CTSOP43234 321 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 DGKGP49619 791 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 SERPINB9P50453 376 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 ECT2LQ008S8 904 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 PDGFRLQ15198 375 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 PDPK2PQ6A1A2 396 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 TRABD2AQ86V40 505 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 KCNMB4Q86W47 210 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 YAF2Q8IY57 180 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 PDCD6IPQ8WUM4 868 aaKnown RBP16.71■□□□□ 0.27
PCGF3-213ENST00000620529 ASIC4Q96FT7 647 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 ZFYVE19Q96K21 471 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 S1PR5Q9H228 398 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 EBF3Q9H4W6 596 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 HS3ST2Q9Y278 367 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 PCDHGC4Q9Y5F7 938 aa16.71■□□□□ 0.27
PCGF3-213ENST00000620529 DENND4AQ7Z401 1863 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 KRT38O76015 456 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 SRCP12931 536 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 ARSAP15289 507 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 FCARP24071 287 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 STK19P49842 368 aaPredicted RBP16.7■□□□□ 0.26
PCGF3-213ENST00000620529 SNRPD1P62314 119 aaKnown RBP16.7■□□□□ 0.26
PCGF3-213ENST00000620529 ACCSLQ4AC99 568 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 MBLAC2Q68D91 279 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 TANGO2Q6ICL3 276 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 NLRP9Q7RTR0 991 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 CNPY4Q8N129 248 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 RYBPQ8N488 228 aaPredicted RBP16.7■□□□□ 0.26
PCGF3-213ENST00000620529 PAF1Q8N7H5 531 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 BLOC1S5Q8TDH9 187 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 ZNF778Q96MU6 729 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 TRIB3Q96RU7 358 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 SMC6Q96SB8 1091 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 IL1RAPL1Q9NZN1 696 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 MTCH2Q9Y6C9 303 aa16.7■□□□□ 0.26
PCGF3-213ENST00000620529 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.69■□□□□ 0.26
PCGF3-213ENST00000620529 BRAFP15056 766 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 NNMTP40261 264 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 CSNK1DP48730 415 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 SMAD1Q15797 465 aaKnown RBP16.69■□□□□ 0.26
PCGF3-213ENST00000620529 EMC10Q5UCC4 262 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 C22orf39Q6P5X5 142 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 LPCAT1Q8NF37 534 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 OR2AP1Q8NGE2 309 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 GABPB2Q8TAK5 448 aaPredicted RBP16.69■□□□□ 0.26
PCGF3-213ENST00000620529 WFIKKN2Q8TEU8 576 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 ISG20Q96AZ6 181 aaKnown RBP16.69■□□□□ 0.26
PCGF3-213ENST00000620529 MYADMQ96S97 322 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 CEP44Q9C0F1 390 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 TRABDQ9H4I3 376 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 KCNK9Q9NPC2 374 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 FBXO10Q9UK96 956 aa16.69■□□□□ 0.26
PCGF3-213ENST00000620529 A0A1W2PPC1 479 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms