RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 GRASPQ7Z6J2 395 aaPredicted RBP12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 STRA8Q7Z7C7 330 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 CCDC117Q8IWD4 279 aaPredicted RBP12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 CMTM8Q8IZV2 173 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 CPXM2Q8N436 756 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 PPM1EQ8WY54 764 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 ING5Q8WYH8 240 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 PSKH2Q96QS6 385 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 SRPK1Q96SB4 655 aaKnown RBP12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 FEM1AQ9BSK4 669 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 IQCGQ9H095 443 aaKnown RBP12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 KDM4CQ9H3R0 1056 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 NOD2Q9HC29 1040 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 YBX2Q9Y2T7 364 aaKnown RBP12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 HCFC2Q9Y5Z7 792 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 CCDC195A0A1B0GUA6 201 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 E2F8A0AVK6 867 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 H0YHG0 523 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 COPEO14579 308 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 TM9SF1O15321 606 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 EDF1O60869 148 aaKnown RBP12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 FSBPO95073 299 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 ITGA2BP08514 1039 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 BGNP21810 368 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 GP5P40197 560 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 ETV4P43268 484 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 PDE1BQ01064 536 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 MPP7Q5T2T1 576 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 TEDDM1Q5T9Z0 273 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 ADGRD2Q7Z7M1 963 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 PACS2Q86VP3 889 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 ATP2A3Q93084 1043 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 CPNE1Q99829 537 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 MGME1Q9BQP7 344 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 ARHGAP26Q9UNA1 814 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 ARL2BPQ9Y2Y0 163 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 MYLKQ15746 1914 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 MIA3Q5JRA6 1907 aa12.83□□□□□ -0.36
TNFAIP3-209ENST00000619035 GBF1Q92538 1859 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 GFRA2O00451 464 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 MOSPD3O75425 235 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 CNTFP26441 200 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 IRX4P78413 519 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 CDK18Q07002 472 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 FRG1Q14331 258 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 RFTN1Q14699 578 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 CYTH1Q15438 398 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 CNGA3Q16281 694 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 LACTB2Q53H82 288 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 PDPK2PQ6A1A2 396 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 NDUFAF2Q8N183 169 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 RIN3Q8TB24 985 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 ARNT2Q9HBZ2 717 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 VPS51Q9UID3 782 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 CLEC4EQ9ULY5 219 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 HEATR9A2RTY3 570 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 TMCC1O94876 653 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 PAPLNO95428 1278 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 PRKCGP05129 697 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 ATXN1LP0C7T5 689 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 PIRTP0C851 137 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 MPPE1Q53F39 396 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 RGS9BPQ6ZS82 235 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 APCDD1Q8J025 514 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 ARMC2Q8NEN0 867 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 BLOC1S5Q8TDH9 187 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 TADA1Q96BN2 335 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 TASP1Q9H6P5 420 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 MANSC1Q9H8J5 431 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 NPHS2Q9NP85 383 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 TDP1Q9NUW8 608 aa12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 FCF1Q9Y324 198 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-209ENST00000619035 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 TPP1O14773 563 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 INSIG1O15503 277 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 PRAMEF12O95522 483 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 CYBBP04839 570 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 DHRS4L1P0CG22 281 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 NEFHP12036 1026 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 PAMP19021 973 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 CBX2Q14781 532 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 SLC14A2Q15849 920 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 GRTP1Q5TC63 336 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 RBBP8Q99708 897 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 KLHL14Q9P2G3 628 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 DCTN4Q9UJW0 460 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 CHKBQ9Y259 395 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 STARD13Q9Y3M8 1113 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 HELZP42694 1942 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 CXorf51AA0A1B0GTR3 108 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 LOC285095A0A1B0GVY8 99 aa12.81□□□□□ -0.36
TNFAIP3-209ENST00000619035 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms