RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ATL3Q6DD88 541 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ARCQ7LC44 396 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 PTRH1Q86Y79 214 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 AVL9Q8NBF6 648 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 KIAA0895Q8NCT3 520 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 FCRL4Q96PJ5 515 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 VPS51Q9UID3 782 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SLC5A6Q9Y289 635 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 KLF2Q9Y5W3 355 aaPredicted RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 DOCK9Q9BZ29 2069 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 C21orf140B9A014 251 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 DAB1O75553 588 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 TIMP2P16035 220 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 GNLYP22749 145 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 HTR1BP28222 390 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 OAS2P29728 719 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 CCR1P32246 355 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ABL2P42684 1182 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 THOP1P52888 689 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SRP54P61011 504 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 LAMB3Q13751 1172 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 C16orf72Q14CZ0 275 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CRB2Q5IJ48 1285 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 FAXCQ5TGI0 409 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 RAP1GAP2Q684P5 730 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ZDHHC17Q8IUH5 632 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 GLIS1Q8NBF1 620 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 PCDH19Q8TAB3 1148 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 NOC3LQ8WTT2 800 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 COG1Q8WTW3 980 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 EDEM1Q92611 657 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 FAM81BQ96LP2 452 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CCDC74BQ96LY2 380 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 WDR92Q96MX6 357 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SEMA6CQ9H3T2 930 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 FZD3Q9NPG1 666 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SIDT1Q9NXL6 827 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 POLHQ9Y253 713 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 MN1Q10571 1320 aaPredicted RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 FAM237AA0A1B0GTK4 181 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 ZSCAN5CA6NGD5 496 aaPredicted RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 TULP2O00295 520 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 MTSS1O43312 755 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 LEFTY1O75610 366 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 MT-ND3P03897 115 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 GRNP28799 593 aaKnown RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 CD1CP29017 333 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 CSNK1DP48730 415 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 COPB1P53618 953 aaKnown RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 UGT8Q16880 541 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 PRRT3Q5FWE3 981 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 OR6B2Q6IFH4 312 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 RETSATQ6NUM9 610 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 FBXL22Q6P050 247 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 TMEM71Q6P5X7 295 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 ASB18Q6ZVZ8 466 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 CPT1CQ8TCG5 803 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 THAP4Q8WY91 577 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 SEMA4DQ92854 862 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 ARHGEF2Q92974 986 aaKnown RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 NT5C3BQ969T7 300 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 HDAC11Q96DB2 347 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 RTP4Q96DX8 246 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 EEF2KMTQ96G04 330 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 RPL10LQ96L21 214 aaKnown RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 OSBPL2Q9H1P3 480 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 THAP9Q9H5L6 903 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 C5AR2Q9P296 337 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 KLQ9UEF7 1012 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 CEP83Q9Y592 693 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 SDK1Q7Z5N4 2213 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 SSU72P8A0A1W2PR75 194 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 DPM1O60762 260 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 TM7SF2O76062 418 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 PCDH8O95206 1070 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 ITIH1P19827 911 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 FASLGP48023 281 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 MAPKAPK2P49137 400 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 MXI1P50539 228 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 NUCB2P80303 420 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 SEMA5AQ13591 1074 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 IRF4Q15306 451 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 ARSIQ5FYB1 569 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 ZNF787Q6DD87 383 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 PMF1Q6P1K2 205 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 TMPRSS9Q7Z410 1059 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 ARHGAP22Q7Z5H3 698 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 PIM3Q86V86 326 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 GUF1Q8N442 669 aaKnown RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 LINC00301Q8NCQ3 95 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 PTCD2Q8WV60 388 aaKnown RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 POM121Q96HA1 1249 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 TUBGCP5Q96RT8 1024 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 APOOQ9BUR5 198 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 TCEAL2Q9H3H9 227 aaPredicted RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 GPN2Q9H9Y4 310 aaPredicted RBP4.63□□□□□ -1.67
SNCA-213ENST00000618500 HS3ST4Q9Y661 456 aa4.63□□□□□ -1.67
SNCA-213ENST00000618500 LOC101059948A0A1B0GTJ6 334 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 IGLON5A6NGN9 336 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 C16orf96A6NNT2 1141 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms