RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ATPAF2Q8N5M1 289 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 TSC1Q92574 1164 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 KLK6Q92876 244 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 KLHL32Q96NJ5 620 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 MYOCQ99972 504 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 CINPQ9BW66 212 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-228ENST00000618469 CALN1Q9BXU9 219 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 RCOR3Q9P2K3 495 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-228ENST00000618469 IPO11Q9UI26 975 aaKnown RBP16.2■□□□□ 0.18
BRCA1-228ENST00000618469 DMTF1Q9Y222 760 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 ASXL3Q9C0F0 2248 aa16.2■□□□□ 0.18
BRCA1-228ENST00000618469 ANKRD36A6QL64 1941 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 SHROOM3Q8TF72 1996 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 C16orf96A6NNT2 1141 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 WNT9AO14904 365 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 VILLO15195 856 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 INSIG1O15503 277 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 MFSD11O43934 449 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 PALMO75781 387 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 PIGNO95427 931 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 PRB1P04280 392 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 WNT1P04628 370 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 KRT7P08729 469 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 CD38P28907 300 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 NUDT1P36639 197 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 ABL2P42684 1182 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 IL10RBQ08334 325 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 DPYSL3Q14195 570 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 ATP13A4Q4VNC1 1196 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 SLC45A4Q5BKX6 768 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 LRRC73Q5JTD7 316 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 SEL1L3Q68CR1 1132 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 HORMAD1Q86X24 394 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 VOPP1Q96AW1 172 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 FZD3Q9NPG1 666 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 INTUQ9ULD6 942 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 ITM2BQ9Y287 266 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 FADS3Q9Y5Q0 445 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 ACACAQ13085 2346 aa16.19■□□□□ 0.18
BRCA1-228ENST00000618469 DOCK9Q9BZ29 2069 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 APC2O95996 2303 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 A0A1W2PR77 199 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 EIF4E1BA6NMX2 242 aaKnown RBP16.18■□□□□ 0.18
BRCA1-228ENST00000618469 NEMP1O14524 444 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 MTA2O94776 668 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 CTSKP43235 329 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 RGRP47804 291 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 ARSEP51690 589 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 RFTN1Q14699 578 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-228ENST00000618469 ZNF284Q2VY69 593 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 TMCO4Q5TGY1 634 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 KIAA1161Q6NSJ0 714 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 NEK5Q6P3R8 708 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 CCNI2Q6ZMN8 369 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-228ENST00000618469 NAXDQ8IW45 347 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 KCTD6Q8NC69 237 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
BRCA1-228ENST00000618469 FAM71BQ8TC56 605 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 ADAMTS14Q8WXS8 1223 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 SKA1Q96BD8 255 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 ZNF670Q9BS34 389 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 TM7SF3Q9NS93 570 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 GGT7Q9UJ14 662 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 ZFR2Q9UPR6 939 aaKnown RBP16.18■□□□□ 0.18
BRCA1-228ENST00000618469 CA5BQ9Y2D0 317 aa16.18■□□□□ 0.18
BRCA1-228ENST00000618469 URB1O60287 2271 aaKnown RBP16.18■□□□□ 0.18
BRCA1-228ENST00000618469 GOLGA4Q13439 2230 aaKnown RBP16.17■□□□□ 0.18
BRCA1-228ENST00000618469 GOLGA8CPA6NN73 597 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 PRAMEF26H0Y7S4 382 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 H0Y8X5 98 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 KCNK3O14649 394 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 SLC31A1O15431 190 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 AP1G1O43747 822 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 IL4RP24394 825 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
BRCA1-228ENST00000618469 ARHGAP25P42331 645 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 MAGEA1P43355 309 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 CCT8P50990 548 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 ZNF235Q14590 738 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 PDK2Q15119 407 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 TMEM259Q4ZIN3 620 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 CFAP58Q5T655 872 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 NCBP2-AS2Q69YL0 99 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 RAB7BQ96AH8 199 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 PANX2Q96RD6 677 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 SEPT3Q9UH03 358 aa16.17■□□□□ 0.18
BRCA1-228ENST00000618469 LRRD1A4D1F6 860 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 MUSKO15146 869 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 SPINT1O43278 529 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 ZNF883P0CG24 379 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 HNRNPA2B1P22626 353 aaKnown RBP16.16■□□□□ 0.18
BRCA1-228ENST00000618469 XPAP23025 273 aaPredicted RBP16.16■□□□□ 0.18
BRCA1-228ENST00000618469 AKT2P31751 481 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 RPS21P63220 83 aaKnown RBP16.16■□□□□ 0.18
BRCA1-228ENST00000618469 IL9RQ01113 521 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 SLC10A7Q0GE19 358 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 SLC14A1Q13336 389 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 LBRQ14739 615 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms