RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FEM1CQ96JP0 617 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 NSMCE3Q96MG7 304 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 DDX50Q9BQ39 737 aaKnown RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 FAM167BQ9BTA0 163 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 TMEM120AQ9BXJ8 343 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 MUC3BQ9H195 1237 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 NOD2Q9HC29 1040 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 FBXO5Q9UKT4 447 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 MAFFQ9ULX9 164 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 KCTD3Q9Y597 815 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CPQQ9Y646 472 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 MROH6A6NGR9 719 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 AURKAO14965 403 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 GREM1O60565 184 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 TBL1XO60907 577 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 SERPINF2P08697 491 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 HSPA8P11142 646 aaKnown RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 HDCP19113 662 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 HADHAP40939 763 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 CSRP3P50461 194 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 CREMQ03060 361 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 GAREM2Q75VX8 874 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZBED2Q9BTP6 218 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 ACE2Q9BYF1 805 aaPredicted RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 COPG2Q9UBF2 871 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 STOML2Q9UJZ1 356 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 NUMBLQ9Y6R0 609 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 CXCL14O95715 111 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 C1RP00736 705 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 ARFIP2P53365 341 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 HTRA4P83105 476 aaPredicted RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 DBN1Q16643 649 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 CCDC153Q494R4 210 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 PABPC1LQ4VXU2 614 aaKnown RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 FBXW10Q5XX13 1052 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 GPR65Q8IYL9 337 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 CARNMT1Q8N4J0 409 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 PNPLA1Q8N8W4 532 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 PSKH2Q96QS6 385 aa17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 FBXO6Q9NRD1 293 aaPredicted RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 CXXC1Q9P0U4 656 aaPredicted RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 MARCOQ9UEW3 520 aaPredicted RBP17.49■□□□□ 0.39
PCDHGC3-205ENST00000617641 FAM95CA0A1B0GW59 222 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 NRG2O14511 850 aaPredicted RBP17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ITM2AO43736 263 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 HAUS5O94927 633 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 OLFM2O95897 454 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 PIRTP0C851 137 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 KITP10721 976 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 HLA-DPA1P20036 260 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 SCNN1BP51168 640 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ARSDP51689 593 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZNF460Q14592 562 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 FSCBQ5H9T9 825 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ARMC3Q5W041 872 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 TMC7Q7Z402 723 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 MTDHQ86UE4 582 aaKnown RBP17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ARID3BQ8IVW6 561 aaPredicted RBP17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 BLOC1S5Q8TDH9 187 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 BHMTQ93088 406 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 TLK1Q9UKI8 766 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 LDB2O43679 373 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 BUD23O43709 281 aaKnown RBP17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 SNAP91O60641 907 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 LYPLA1O75608 230 aaPredicted RBP17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 PAPSS2O95340 614 aaPredicted RBP17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 FGBP02675 491 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 FGF1P05230 155 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 SLC35E2BP0CK96 405 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 MYL2P10916 166 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 CPA3P15088 417 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 CD151P48509 253 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 CYTH1Q15438 398 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZNF789Q5FWF6 425 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 CNSTQ6PJW8 725 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 LINGO4Q6UY18 593 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 CEP97Q8IW35 865 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 MAB21L3Q8N8X9 362 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 HDAC10Q969S8 669 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ELMO2Q96JJ3 720 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 C1QTNF1Q9BXJ1 281 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 THAP1Q9NVV9 213 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 ARL5AQ9Y689 179 aa17.48■□□□□ 0.39
PCDHGC3-205ENST00000617641 H0Y626 953 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 LRG1P02750 347 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 MZF1P28698 734 aaPredicted RBP17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 ARF5P84085 180 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 Q6ZNB5 142 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 PTAR1Q7Z6K3 402 aaPredicted RBP17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 TMC8Q8IU68 726 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 CRLF3Q8IUI8 442 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 GPATCH11Q8N954 259 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 TRIB3Q96RU7 358 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 NMRAL1Q9HBL8 299 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 SLC40A1Q9NP59 571 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 HEY2Q9UBP5 337 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 TRIM33Q9UPN9 1127 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 ASB3Q9Y575 518 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 OR51F1A6NGY5 319 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms