RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	SCUBE3	Q8IX30	993 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RAVER1	Q8IY67	606 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MDM1	Q8TC05	714 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RNF145	Q96MT1	663 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	FNDC11	Q9BVV2	318 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ELOVL2	Q9NXB9	296 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	KCNK4	Q9NYG8	393 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	AGO1	Q9UL18	857 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	N6AMT1	Q9Y5N5	214 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RIMBP3C	A6NJZ7	1639 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RIMBP3B	A6NNM3	1639 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RIMBP3	Q9UFD9	1639 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ANKRD65	E5RJM6	399 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	TNFAIP8	O95379	198 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	PRKAR2A	P13861	404 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	H2AFX	P16104	143 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	IRAK1	P51617	712 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SLC12A3	P55017	1021 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ST3GAL1	Q11201	340 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SLC44A4	Q53GD3	710 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	USP49	Q70CQ1	688 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	JAZF1	Q86VZ6	243 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ANKRD52	Q8NB46	1076 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SPPL2B	Q8TCT7	592 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	GDPD5	Q8WTR4	605 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	WDR18	Q9BV38	432 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SEMA4B	Q9NPR2	832 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SLC12A4	Q9UP95	1085 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	HPSE	Q9Y251	543 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MYRF	Q9Y2G1	1151 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271		A0A0B4J269	797 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	LRRC72	A6NJI9	287 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	CLPTM1	O96005	669 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	GIMD1	P0DJR0	217 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	BMP7	P18075	431 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	LPO	P22079	712 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	ATP5F1	P24539	256 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	RFTN2	Q52LD8	501 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	PROSER1	Q86XN7	944 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	LRRC52	Q8N7C0	313 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	OR4A15	Q8NGL6	344 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	HCAR2	Q8TDS4	363 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	TTPAL	Q9BTX7	342 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	DNAJC5	Q9H3Z4	198 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	TLE6	Q9H808	572 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	TMPRSS4	Q9NRS4	437 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	SPATA2	Q9UM82	520 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	TPP1	O14773	563 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	ATP9A	O75110	1047 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	FGB	P02675	491 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	GLI1	P08151	1106 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	HNRNPH1	P31943	449 aa	Known RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	SOX10	P56693	466 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	LIN54	Q6MZP7	749 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	KLHL17	Q6TDP4	642 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	BTN2A1	Q7KYR7	527 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	BEND5	Q7L4P6	421 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	STRADA	Q7RTN6	431 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	PEX5L	Q8IYB4	626 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	OR6Y1	Q8NGX8	325 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	PPTC7	Q8NI37	304 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZNF563	Q8TA94	476 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	ASZ1	Q8WWH4	475 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	AP3S1	Q92572	193 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	MIEF2	Q96C03	454 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	FAM163A	Q96GL9	167 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	TRAPPC9	Q96Q05	1148 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	AIF1L	Q9BQI0	150 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	IRX2	Q9BZI1	471 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	C6orf62	Q9GZU0	229 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	FAM124B	Q9H5Z6	455 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	CLIC5	Q9NZA1	410 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	NINJ2	Q9NZG7	142 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	NAALADL1	Q9UQQ1	740 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	LYVE1	Q9Y5Y7	322 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	CLOCK	O15516	846 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	TIPRL	O75663	272 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	PRNP	P04156	253 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	LYN	P07948	512 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	CCNB1	P14635	433 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	CDH5	P33151	784 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	PTPN9	P43378	593 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	OMP	P47874	163 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	USP4	Q13107	963 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	FAM92B	Q6ZTR7	304 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	CACUL1	Q86Y37	369 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	UXS1	Q8NBZ7	420 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	PIK3C3	Q8NEB9	887 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	C2orf15	Q8WU43	125 aa	Known RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	TRAPPC12	Q8WVT3	735 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	COL26A1	Q96A83	441 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	ACO2	Q99798	780 aa	Known RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	MRPL57	Q9BQC6	102 aa	Known RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	SLC28A3	Q9HAS3	691 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	POLM	Q9NP87	494 aa	Predicted RBP	7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	SAR1A	Q9NR31	198 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	GGA2	Q9UJY4	613 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	PCDHB1	Q9Y5F3	818 aa		7.41	□□□□□ -1.22
PCDH15-231	ENST00000617271	MEGF6	O75095	1541 aa		7.41	□□□□□ -1.22

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