RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 TBC1D3KA0A087X1G2 549 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 TBC1D3FA6NER0 549 aaPredicted RBP32.17■■■□□ 2.74
FMR1-216ENST00000616614 LRRC72A6NJI9 287 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 TBC1D3LB9A6J9 549 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 TRAFD1O14545 582 aaPredicted RBP32.17■■■□□ 2.74
FMR1-216ENST00000616614 TBC1D3HP0C7X1 549 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 ITIH2P19823 946 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 TGM1P22735 817 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 DSC2Q02487 901 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 ITKQ08881 620 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 GRM3Q14832 879 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 LRRC73Q5JTD7 316 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 CCDC181Q5TID7 509 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 TBC1D3GQ6DHY5 549 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 ALG1LQ6GMV1 187 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 TBC1D3CQ6IPX1 549 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 CYP2U1Q7Z449 544 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 TBC1D3Q8IZP1 549 aaPredicted RBP32.17■■■□□ 2.74
FMR1-216ENST00000616614 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP32.17■■■□□ 2.74
FMR1-216ENST00000616614 ARRDC2Q8TBH0 407 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 DNASE2BQ8WZ79 361 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 PIGKQ92643 395 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 SEMA3CQ99985 751 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 ORAI3Q9BRQ5 295 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 SMOC1Q9H4F8 434 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 ATP13A3Q9H7F0 1226 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 EBF2Q9HAK2 575 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 PARD6AQ9NPB6 346 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 SEPT10Q9P0V9 454 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 PCDHGC4Q9Y5F7 938 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 PCDHGA5Q9Y5G8 931 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 FADS3Q9Y5Q0 445 aa32.17■■■□□ 2.74
FMR1-216ENST00000616614 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP32.17■■■□□ 2.74
FMR1-216ENST00000616614 THADAQ6YHU6 1953 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 TSPAN11A1L157 253 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 NIPAL4Q0D2K0 466 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 PLA2G2CQ5R387 149 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 ECHDC3Q96DC8 303 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 POLR1EQ9GZS1 481 aaKnown RBP32.16■■■□□ 2.74
FMR1-216ENST00000616614 KDM4CQ9H3R0 1056 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 AMACRQ9UHK6 382 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 GGT7Q9UJ14 662 aa32.16■■■□□ 2.74
FMR1-216ENST00000616614 OTOGLQ3ZCN5 2332 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 MEI4A8MW99 385 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 KCNK3O14649 394 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 MPLP40238 635 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 BCL2L1Q07817 233 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 SPEM2Q0P670 501 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 TTC7BQ86TV6 843 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 ALYREFQ86V81 257 aaKnown RBP32.15■■■□□ 2.74
FMR1-216ENST00000616614 QKIQ96PU8 341 aaKnown RBP eCLIP32.15■■■□□ 2.743e-23■■■■■ 59.5
FMR1-216ENST00000616614 EIF2B4Q9UI10 523 aaKnown RBP32.15■■■□□ 2.74
FMR1-216ENST00000616614 ITM2BQ9Y287 266 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 TTLL3Q9Y4R7 772 aa32.15■■■□□ 2.74
FMR1-216ENST00000616614 SHROOM3Q8TF72 1996 aa32.14■■■□□ 2.74
FMR1-216ENST00000616614 ENC1O14682 589 aa32.14■■■□□ 2.74
FMR1-216ENST00000616614 SERPINA4P29622 427 aa32.14■■■□□ 2.74
FMR1-216ENST00000616614 MAPK8P45983 427 aa32.14■■■□□ 2.74
FMR1-216ENST00000616614 WASHC5Q12768 1159 aa32.14■■■□□ 2.74
FMR1-216ENST00000616614 XRCC4Q13426 336 aa32.14■■■□□ 2.74
FMR1-216ENST00000616614 PEAR1Q5VY43 1037 aaPredicted RBP32.14■■■□□ 2.74
FMR1-216ENST00000616614 HCAR2Q8TDS4 363 aa32.14■■■□□ 2.74
FMR1-216ENST00000616614 R3HDM2Q9Y2K5 976 aaKnown RBP32.14■■■□□ 2.74
FMR1-216ENST00000616614 WDR87Q6ZQQ6 2873 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 PTPN3P26045 913 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 CCDC15Q0P6D6 951 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 TRAF2Q12933 501 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 SLC45A4Q5BKX6 768 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 ZNF569Q5MCW4 686 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 SYCP2LQ5T4T6 812 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 SYT12Q8IV01 421 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 RGL4Q8IZJ4 473 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 C1orf216Q8TAB5 229 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 SNX19Q92543 992 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 AGAP3Q96P47 875 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 CARD9Q9H257 536 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 PREBQ9HCU5 417 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 SPAG17Q6Q759 2223 aa32.13■■■□□ 2.73
FMR1-216ENST00000616614 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP32.12■■■□□ 2.73
FMR1-216ENST00000616614 PATE3B3GLJ2 98 aa32.12■■■□□ 2.73
FMR1-216ENST00000616614 AREL1O15033 823 aa32.12■■■□□ 2.73
FMR1-216ENST00000616614 HTRA2O43464 458 aaPredicted RBP32.12■■■□□ 2.73
FMR1-216ENST00000616614 TEX44Q53QW1 395 aa32.12■■■□□ 2.73
FMR1-216ENST00000616614 RALGPS1Q5JS13 557 aa32.12■■■□□ 2.73
FMR1-216ENST00000616614 WDR45BQ5MNZ6 344 aa32.12■■■□□ 2.73
FMR1-216ENST00000616614 SLC35F6Q8N357 371 aa32.12■■■□□ 2.73
FMR1-216ENST00000616614 HINFPQ9BQA5 517 aa32.12■■■□□ 2.73
FMR1-216ENST00000616614 ZFR2Q9UPR6 939 aaKnown RBP32.12■■■□□ 2.73
FMR1-216ENST00000616614 HACD1B0YJ81 288 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 H7C0C1 242 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 AP1G1O43747 822 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 RNGTTO60942 597 aaKnown RBP32.11■■■□□ 2.73
FMR1-216ENST00000616614 PRKCGP05129 697 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 MMP2P08253 660 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 RBL1P28749 1068 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 MAT2AP31153 395 aaKnown RBP32.11■■■□□ 2.73
FMR1-216ENST00000616614 ATP5OP48047 213 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 CCR5P51681 352 aa32.11■■■□□ 2.73
FMR1-216ENST00000616614 EIF3EP60228 445 aaKnown RBP32.11■■■□□ 2.73
FMR1-216ENST00000616614 UGP2Q16851 508 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms