RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 BNIP3LO60238 219 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 LTFP02788 710 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 TMEM253P0C7T8 217 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 NME1P15531 152 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 NOP2P46087 812 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 CYP4F2P78329 520 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 SLC12A1Q13621 1099 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 CLCA4Q14CN2 919 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 SEL1L3Q68CR1 1132 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 DENND1BQ6P3S1 775 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 PTRH1Q86Y79 214 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 DCP2Q8IU60 420 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 FBXO39Q8N4B4 442 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 MNS1Q8NEH6 495 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 SLC30A5Q8TAD4 765 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 EPS8L1Q8TE68 723 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 PSMG3-AS1Q96PY0 264 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 EPN3Q9H201 632 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 GPR27Q9NS67 375 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 IGSF5Q9NSI5 407 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 GEMIN8Q9NWZ8 242 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 ACSL6Q9UKU0 697 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 ZFR2Q9UPR6 939 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 CNTN6Q9UQ52 1028 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 TLR6Q9Y2C9 796 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 JRKLQ9Y4A0 524 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 KIF26BQ2KJY2 2108 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 POM121BA6NF01 834 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 H3BM21 787 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 DDX3XO00571 662 aaKnown RBP eCLIP17.91■□□□□ 0.462e-8■■■■■ 37.2
TRAPPC3-209ENST00000616395 ALOX15BO15296 676 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 ATP9BO43861 1147 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 SETSIPP0DME0 302 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 GNA15P30679 374 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 UGT1A5P35504 534 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 SPIDRQ14159 915 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 IGFBP7Q16270 282 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 RAP1GAP2Q684P5 730 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 PMF1Q6P1K2 205 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 RAB11FIP2Q7L804 512 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 B3GNT8Q7Z7M8 397 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 VASH2Q86V25 355 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 CIR1Q86X95 450 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 MSANTD4Q8NCY6 345 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 LMX1AQ8TE12 382 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 DQX1Q8TE96 717 aaKnown RBP17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 CLEC4CQ8WTT0 213 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 IRGQQ8WZA9 623 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 LIN37Q96GY3 246 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 SLC39A13Q96H72 371 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 CCDC3Q9BQI4 270 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 EPB41L5Q9HCM4 733 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 KIAA1257Q9ULG3 409 aa17.91■□□□□ 0.46
TRAPPC3-209ENST00000616395 SPTY2D1-AS1A0A0U1RR47 76 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 FAM170AA1A519 330 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 RIOK3O14730 519 aaKnown RBP17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 THAP12O43422 761 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 FYNP06241 537 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 MYBL1P10243 752 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 LIPCP11150 499 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 HGFP14210 728 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 WT1P19544 449 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 PLK1P53350 603 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 FOXK1P85037 733 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 DLG2Q15700 870 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 CNGA2Q16280 664 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 SKIDA1Q1XH10 827 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 PARGQ86W56 976 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 CHSY1Q86X52 802 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 SLC35F3Q8IY50 421 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 WDR48Q8TAF3 677 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 FAM174AQ8TBP5 190 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 HTR3CQ8WXA8 447 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 SERPINB11Q96P15 392 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 IL12RB2Q99665 862 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 BOCQ9BWV1 1114 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 LACRTQ9GZZ8 138 aa17.9■□□□□ 0.46
TRAPPC3-209ENST00000616395 KPNA3O00505 521 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 TPP1O14773 563 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 PCDH8O95206 1070 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 SLU7O95391 586 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 CTSLP07711 333 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 JUNDP17535 347 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 TACR2P21452 398 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 NSFP46459 744 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 RPIAP49247 311 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 VASPP50552 380 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 TMEM259Q4ZIN3 620 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 MANEAQ5SRI9 462 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 KYAT3Q6YP21 454 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 SLC47A2Q86VL8 602 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 PASD1Q8IV76 773 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 CEP112Q8N8E3 955 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 MYRIPQ8NFW9 859 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 ZNF564Q8TBZ8 553 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 SLC35F5Q8WV83 523 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 NAT6Q93015 286 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 SLC25A13Q9UJS0 675 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 NOCTQ9UK39 431 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms