RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IL12RB2Q99665 862 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 LMBRD1Q9NUN5 540 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 SEPT11Q9NVA2 429 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 APOBEC3BQ9UH17 382 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 SALL4Q9UJQ4 1053 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 ATMQ13315 3056 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 RP1P56715 2156 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 TCRBV5S1A1TA0A578 114 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 EME2A4GXA9 379 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 SIGLEC16A6NMB1 481 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 TPP1O14773 563 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 ATXN7O15265 892 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 LZTS3O60299 673 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 GCATO75600 419 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 TM7SF2O76062 418 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 DXOO77932 396 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 LSSP48449 732 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 PCBP4P57723 403 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 RAD51Q06609 339 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 C1orf61Q13536 156 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 PTK2BQ14289 1009 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 ISXQ2M1V0 245 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 INO80DQ53TQ3 878 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 SCYL2Q6P3W7 929 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 PHACTR4Q8IZ21 702 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 LSMEM2Q8N112 164 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 TP53I13Q8NBR0 393 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 NEK11Q8NG66 645 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 CXorf40AQ8TE69 158 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 SLC39A7Q92504 469 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 HIC2Q96JB3 615 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 PCMTD1Q96MG8 357 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 POLR1BQ9H9Y6 1135 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 MBNL1Q9NR56 388 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 NCKIPSDQ9NZQ3 722 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 SPASTQ9UBP0 616 aa21.03■□□□□ 0.96
TRAPPC3-208ENST00000616074 RASA4BC9J798 803 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 INSIG1O15503 277 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 RASA4O43374 803 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 CREB3O43889 395 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 TIMP2P16035 220 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 ZNF143P52747 638 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 CXADRP78310 365 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 NR0B2Q15466 257 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 KLHL40Q2TBA0 621 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 PRRT3Q5FWE3 981 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 DNAJC24Q6P3W2 148 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 CRTC1Q6UUV9 634 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 GPR155Q7Z3F1 870 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 EXOC2Q96KP1 924 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 MCEEQ96PE7 176 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 EPAS1Q99814 870 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 WRAP53Q9BUR4 548 aaKnown RBP21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 LRRC61Q9BV99 259 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 BOCQ9BWV1 1114 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 DKK3Q9UBP4 350 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 LHX3Q9UBR4 397 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 FZD10Q9ULW2 581 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 MFHAS1Q9Y4C4 1052 aa21.02■□□□□ 0.96
TRAPPC3-208ENST00000616074 LRP4O75096 1905 aa21.02■□□□□ 0.95
TRAPPC3-208ENST00000616074 WASH4PA8MWX3 477 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 C1QL1O75973 258 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 PIGNO95427 931 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 ADKP55263 362 aaKnown RBP21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 YBEYP58557 167 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 RPL7AP62424 266 aaKnown RBP21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 YPEL5P62699 121 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 C1QBPQ07021 282 aaKnown RBP21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 SERINC3Q13530 473 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 PERM1Q5SV97 790 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 MACC1Q6ZN28 852 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 RBM43Q6ZSC3 357 aaKnown RBP21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 SLC35F3Q8IY50 421 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 AGPAT1Q99943 283 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 C1QTNF7Q9BXJ2 289 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 ASCL3Q9NQ33 180 aa21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 LIMA1Q9UHB6 759 aaKnown RBP21.01■□□□□ 0.95
TRAPPC3-208ENST00000616074 TEX51A0A1B0GUA7 166 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 A0A1W2PNU3 283 aaPredicted RBP21■□□□□ 0.95
TRAPPC3-208ENST00000616074 LGALS16A8MUM7 142 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 TK2O00142 265 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 RIOK3O14730 519 aaKnown RBP21■□□□□ 0.95
TRAPPC3-208ENST00000616074 MUSKO15146 869 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 CASC3O15234 703 aaKnown RBP21■□□□□ 0.95
TRAPPC3-208ENST00000616074 EIF4A3P38919 411 aaKnown RBP21■□□□□ 0.95
TRAPPC3-208ENST00000616074 ERVPABLB-1P60509 514 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 IRF4Q15306 451 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 CYTH1Q15438 398 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 PARP15Q460N3 678 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 C3orf38Q5JPI3 329 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 PPP1R15BQ5SWA1 713 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 C6orf132Q5T0Z8 1188 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 UMODL1-AS1Q8N2C9 162 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 ATXN7L3BQ96GX2 97 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 TBATAQ96M53 351 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 SLC13A1Q9BZW2 595 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 CLPBQ9H078 707 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 CATSPERBQ9H7T0 1116 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 SATB2Q9UPW6 733 aa21■□□□□ 0.95
TRAPPC3-208ENST00000616074 COQ6Q9Y2Z9 468 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms