RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 SYPP08247 313 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 GRIA4P48058 902 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
CBWD3-211ENST00000615061 RACK1P63244 317 aaKnown RBP16.92■□□□□ 0.3
CBWD3-211ENST00000615061 ZNF235Q14590 738 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 ZNF284Q2VY69 593 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 KIAA1328Q86T90 577 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 PRPF39Q86UA1 669 aaKnown RBP16.92■□□□□ 0.3
CBWD3-211ENST00000615061 KRT35Q92764 455 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 RTKNQ9BST9 563 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 ANKRD6Q9Y2G4 727 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 SNX11Q9Y5W9 270 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 PJA2O43164 708 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 PSTPIP1O43586 416 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 TIMP2P16035 220 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 DYNLT1P63172 113 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 NSUN2Q08J23 767 aaKnown RBP eCLIP16.91■□□□□ 0.3
CBWD3-211ENST00000615061 FGL2Q14314 439 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 TMEM259Q4ZIN3 620 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 SLC9A4Q6AI14 798 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 NPNTQ6UXI9 565 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 ADAT2Q7Z6V5 191 aaKnown RBP16.91■□□□□ 0.3
CBWD3-211ENST00000615061 TTC7BQ86TV6 843 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 SUV39H2Q9H5I1 410 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 DDX56Q9NY93 547 aaKnown RBP16.91■□□□□ 0.3
CBWD3-211ENST00000615061 HEY1Q9Y5J3 304 aa16.91■□□□□ 0.3
CBWD3-211ENST00000615061 A0A1W2PR77 199 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 GOLGA6L6A8MZA4 724 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 PRKCGP05129 697 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 KRT10P13645 584 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 SDHBP21912 280 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 CDKN2BP42772 138 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 CSNK1DP48730 415 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 SEMG2Q02383 582 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 ADCY2Q08462 1091 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 NAPEPLDQ6IQ20 393 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 NEK5Q6P3R8 708 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-211ENST00000615061 GAREM1Q9H706 876 aa16.9■□□□□ 0.3
CBWD3-211ENST00000615061 ARID1BQ8NFD5 2236 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-211ENST00000615061 BTNL10A8MVZ5 291 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 ZNF487B1APH4 448 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 H0Y8X5 98 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 NEMP1O14524 444 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 AREL1O15033 823 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 AP1G1O43747 822 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 CR2P20023 1033 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 CD38P28907 300 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 MMP13P45452 471 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 GSDMDP57764 484 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 TEAD4Q15561 434 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 HLA-BQ31612 363 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 SETMARQ53H47 684 aaPredicted RBP16.89■□□□□ 0.3
CBWD3-211ENST00000615061 ODF2Q5BJF6 829 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 PRAMEF14Q5SWL7 426 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 MARC1Q5VT66 337 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 B4GALNT4Q76KP1 1039 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 DGLUCYQ7Z3D6 616 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 VSIG1Q86XK7 387 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 RFX6Q8HWS3 928 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 RAB7BQ96AH8 199 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 LGMNQ99538 433 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 MGME1Q9BQP7 344 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 MAK16Q9BXY0 300 aaKnown RBP16.89■□□□□ 0.3
CBWD3-211ENST00000615061 NT5MQ9NPB1 228 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 DKK3Q9UBP4 350 aa16.89■□□□□ 0.3
CBWD3-211ENST00000615061 FNDC3AQ9Y2H6 1198 aaKnown RBP16.89■□□□□ 0.3
CBWD3-211ENST00000615061 CEP295Q9C0D2 2601 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 MACROD2A1Z1Q3 448 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 GRID2IPA4D2P6 1211 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 IGLON5A6NGN9 336 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 APOL1O14791 398 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 PAK4O96013 591 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-211ENST00000615061 SERPINA4P29622 427 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 RENBPP51606 427 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 IFI16Q16666 785 aaKnown RBP16.89■□□□□ 0.29
CBWD3-211ENST00000615061 KAZNQ674X7 775 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 KDM7AQ6ZMT4 941 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 LRRC49Q8IUZ0 686 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.89■□□□□ 0.29
CBWD3-211ENST00000615061 TEX26Q8N6G2 289 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 NSMCE1Q8WV22 266 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 FEM1CQ96JP0 617 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 TUBGCP5Q96RT8 1024 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 ZDHHC5Q9C0B5 715 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 ATP13A3Q9H7F0 1226 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 NOD2Q9HC29 1040 aa16.89■□□□□ 0.29
CBWD3-211ENST00000615061 DNAAF2Q9NVR5 837 aaKnown RBP16.89■□□□□ 0.29
CBWD3-211ENST00000615061 SAE1Q9UBE0 346 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-211ENST00000615061 TPX2Q9ULW0 747 aaKnown RBP16.89■□□□□ 0.29
CBWD3-211ENST00000615061 GOLGA4Q13439 2230 aaKnown RBP16.88■□□□□ 0.29
CBWD3-211ENST00000615061 TSPAN11A1L157 253 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 TRAFD1O14545 582 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-211ENST00000615061 VILLO15195 856 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 MATN3O15232 486 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 RAD51BO15315 384 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 OPHN1O60890 802 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 KCNA4P22459 653 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 CTSKP43235 329 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms