RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 PTPN9P43378 593 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 RHOAP61586 193 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 YPEL5P62699 121 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 PPARDQ03181 441 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 PERM1Q5SV97 790 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 ESRP1Q6NXG1 681 aaKnown RBP18.09■□□□□ 0.49
SMN2-213ENST00000614240 CCDC185Q8N715 623 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 FAM172AQ8WUF8 416 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 CCDC97Q96F63 343 aaPredicted RBP18.09■□□□□ 0.49
SMN2-213ENST00000614240 SLC46A1Q96NT5 459 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 EPAS1Q99814 870 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 NCAPGQ9BPX3 1015 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 MAGEB5Q9BZ81 275 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 ENTPD2Q9Y5L3 495 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 C2CD4BA6NLJ0 364 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 LMO7DNF2Z398 122 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 AREL1O15033 823 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 TCEA3O75764 348 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 PLA2G2AP14555 144 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 NSFP46459 744 aaKnown RBP18.08■□□□□ 0.48
SMN2-213ENST00000614240 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.48
SMN2-213ENST00000614240 FMO1Q01740 532 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 VAC14Q08AM6 782 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 C6orf132Q5T0Z8 1188 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 TRIM72Q6ZMU5 477 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 MACC1Q6ZN28 852 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 SLFN11Q7Z7L1 901 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 SLC35F3Q8IY50 421 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 WDR48Q8TAF3 677 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 SCG3Q8WXD2 468 aaKnown RBP18.08■□□□□ 0.48
SMN2-213ENST00000614240 WRAP53Q9BUR4 548 aaKnown RBP18.08■□□□□ 0.48
SMN2-213ENST00000614240 LRRC61Q9BV99 259 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 SELENOOQ9BVL4 669 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 BOCQ9BWV1 1114 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 TTYH3Q9C0H2 523 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 FAM207AQ9NSI2 230 aaPredicted RBP18.08■□□□□ 0.48
SMN2-213ENST00000614240 WDR70Q9NW82 654 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 GULP1Q9UBP9 304 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 PADI4Q9UM07 663 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 DOCK4Q8N1I0 1966 aa18.08■□□□□ 0.48
SMN2-213ENST00000614240 TOR1BO14657 336 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 YY2O15391 372 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 LZTS3O60299 673 aaPredicted RBP18.07■□□□□ 0.48
SMN2-213ENST00000614240 CTSEP14091 401 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 TSHRP16473 764 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 CHRNB2P17787 502 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 ITIH2P19823 946 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 GPD1P21695 349 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 EPHB2P29323 1055 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 SOX5P35711 763 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 BLKP51451 505 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 HDAC4P56524 1084 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 SPIDRQ14159 915 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 KLHL40Q2TBA0 621 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 EFHC2Q5JST6 749 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 FKBP15Q5T1M5 1219 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 SCYL2Q6P3W7 929 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 IGF2-ASQ6U949 168 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 ARL14Q8N4G2 192 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 NETO2Q8NC67 525 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 WDR36Q8NI36 951 aaKnown RBP18.07■□□□□ 0.48
SMN2-213ENST00000614240 CASKIN2Q8WXE0 1202 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 TBATAQ96M53 351 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 CCDC3Q9BQI4 270 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 NUP62CLQ9H1M0 184 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 VPS16Q9H269 839 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 GANQ9H2C0 597 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 NLRC4Q9NPP4 1024 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 MBNL1Q9NR56 388 aaKnown RBP18.07■□□□□ 0.48
SMN2-213ENST00000614240 ADAM22Q9P0K1 906 aa18.07■□□□□ 0.48
SMN2-213ENST00000614240 ANKRD62A6NC57 917 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 TNFSF15O95150 251 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 TIMP2P16035 220 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 RFC1P35251 1148 aaPredicted RBP18.06■□□□□ 0.48
SMN2-213ENST00000614240 STAT1P42224 750 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 KLK7P49862 253 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 ELP6Q0PNE2 266 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 SYCP1Q15431 976 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 TCEA2Q15560 299 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 PCSK4Q6UW60 755 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 RD3Q7Z3Z2 195 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 HID1Q8IV36 788 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 PYROXD2Q8N2H3 581 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
SMN2-213ENST00000614240 RTL3Q8N8U3 475 aaKnown RBP18.06■□□□□ 0.48
SMN2-213ENST00000614240 TP53I13Q8NBR0 393 aaPredicted RBP18.06■□□□□ 0.48
SMN2-213ENST00000614240 CENPIQ92674 756 aaPredicted RBP18.06■□□□□ 0.48
SMN2-213ENST00000614240 NTAN1Q96AB6 310 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 WBP1Q96G27 269 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 SEPT11Q9NVA2 429 aaKnown RBP18.06■□□□□ 0.48
SMN2-213ENST00000614240 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.06■□□□□ 0.48
SMN2-213ENST00000614240 SIRPGQ9P1W8 387 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 DKK3Q9UBP4 350 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 NEU3Q9UQ49 428 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 PCDHGA8Q9Y5G5 932 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 LOC400499M0QZD8 3231 aa18.06■□□□□ 0.48
SMN2-213ENST00000614240 CCDC187A0A096LP49 1063 aa18.05■□□□□ 0.48
SMN2-213ENST00000614240 A0A1W2PNU3 283 aaPredicted RBP18.05■□□□□ 0.48
SMN2-213ENST00000614240 TMEM110-MUSTN1A8MSY1 372 aa18.05■□□□□ 0.48
SMN2-213ENST00000614240 CREB3O43889 395 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms