RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MAMSTRQ6ZN01 415 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 CEP128Q6ZU80 1094 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 GSPT2Q8IYD1 628 aaKnown RBP11.6□□□□□ -0.55
SLIRP-212ENST00000613856 APCDD1Q8J025 514 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 AHI1Q8N157 1196 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 ZCCHC9Q8N567 271 aaKnown RBP11.6□□□□□ -0.55
SLIRP-212ENST00000613856 MCUQ8NE86 351 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 USP33Q8TEY7 942 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 ZFYVE19Q96K21 471 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 AGAP3Q96P47 875 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 PSKH2Q96QS6 385 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 MGME1Q9BQP7 344 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 GORASP1Q9BQQ3 440 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 SLC25A51Q9H1U9 297 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 EBF3Q9H4W6 596 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 ETNK1Q9HBU6 452 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 ABCB8Q9NUT2 735 aa11.6□□□□□ -0.55
SLIRP-212ENST00000613856 INTS6Q9UL03 887 aaKnown RBP11.6□□□□□ -0.55
SLIRP-212ENST00000613856 GOLGA6CA6NDK9 693 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 GOLGA6BA6NDN3 693 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 MAN2B1O00754 1011 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 PSMD3O43242 534 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 SNAP91O60641 907 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 ANXA9O76027 345 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 NEBLO76041 1014 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 SUN1O94901 812 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 AP2A1O95782 977 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 CD160O95971 181 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 PROS1P07225 676 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 CISD3P0C7P0 127 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 GOLGA6DP0CG33 693 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 SERPINH1P50454 418 aaKnown RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 SLC20A2Q08357 652 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 RUNX3Q13761 415 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 PRPSAP1Q14558 356 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 FAXCQ5TGI0 409 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 STPG1Q5TH74 334 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 ANKRD22Q5VYY1 191 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 KCTD11Q693B1 232 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 LONP2Q86WA8 852 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 TTC17Q96AE7 1141 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 IMP4Q96G21 291 aaKnown RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 POLR1EQ9GZS1 481 aaKnown RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 NT5MQ9NPB1 228 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 DNAJC17Q9NVM6 304 aaKnown RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 GOLGA6AQ9NYA3 693 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 HS3ST2Q9Y278 367 aa11.59□□□□□ -0.55
SLIRP-212ENST00000613856 AAR2Q9Y312 384 aaKnown RBP11.59□□□□□ -0.55
SLIRP-212ENST00000613856 TCRBV7S3A2A0A539 114 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-212ENST00000613856 E7ESA3 106 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 E7EVH7 732 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 EIF3HO15372 352 aaKnown RBP eCLIP11.58□□□□□ -0.56
SLIRP-212ENST00000613856 TULP3O75386 442 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 TMCC1O94876 653 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 KCNK5O95279 499 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 ASLP04424 464 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 APRTP07741 180 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 CR2P20023 1033 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 CES1P23141 567 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 DGKGP49619 791 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 GEMP55040 296 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 ITPRIPL2Q3MIP1 535 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 RALGPS1Q5JS13 557 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 BEND6Q5SZJ8 279 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-212ENST00000613856 GRAMD4Q6IC98 578 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 PSAPL1Q6NUJ1 521 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 UNQ6494/PRO21346Q6UXR6 183 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 CEP68Q76N32 757 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 TMC3Q7Z5M5 1100 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 ADIPOR2Q86V24 386 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 KBTBD6Q86V97 674 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 C12orf40Q86WS4 652 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 RELL1Q8IUW5 271 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 PGBD5Q8N414 524 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 SPEM1Q8N4L4 309 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 MREGQ8N565 214 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 TADA1Q96BN2 335 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 OXNAD1Q96HP4 312 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-212ENST00000613856 MLPHQ9BV36 600 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-212ENST00000613856 TXLNGYQ9BZA5 131 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 LRRC40Q9H9A6 602 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 XAB2Q9HCS7 855 aaKnown RBP11.58□□□□□ -0.56
SLIRP-212ENST00000613856 ARFGAP3Q9NP61 516 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 TRPV5Q9NQA5 729 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 VPS45Q9NRW7 570 aa11.58□□□□□ -0.56
SLIRP-212ENST00000613856 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
SLIRP-212ENST00000613856 LOC400499M0QZD8 3231 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 OTOL1A6NHN0 477 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 MUSKO15146 869 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 FAM153BP0C7A2 387 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 MLNP12872 115 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 GJA4P35212 333 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 MAGEA3P43357 314 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 LIMK1P53667 647 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 ARL4CP56559 192 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms