RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 SCN4BQ8IWT1 228 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 CRYBG2Q8N1P7 616 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 COLGALT1Q8NBJ5 622 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 BHLHE22Q8NFJ8 381 aaPredicted RBP11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 OR10T2Q8NGX3 314 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 HEPHQ9BQS7 1158 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 TXNDC16Q9P2K2 825 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 KIAA1257Q9ULG3 409 aa11.9□□□□□ -0.5
PPP4R3B-204ENST00000612688 KLF11O14901 512 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 ZBTB11O95625 1053 aaPredicted RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 ODC1P11926 461 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 MX2P20592 715 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 RCVRNP35243 200 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 ZNF460Q14592 562 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 STILQ15468 1287 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 GPRIN1Q7Z2K8 1008 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 TMEM173Q86WV6 379 aaPredicted RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 TTC39CQ8N584 583 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 RSPH1Q8WYR4 309 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 C1orf21Q9H246 121 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 SACM1LQ9NTJ5 587 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 ABI2Q9NYB9 513 aaPredicted RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 VPS51Q9UID3 782 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 SNX10Q9Y5X0 201 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 CCNT2O60583 730 aaKnown RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 PSMC3P17980 439 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 WARSP23381 471 aaKnown RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 NDST2P52849 883 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 TUBB3Q13509 450 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 TAZQ16635 292 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 FAM171A1Q5VUB5 890 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 CD300LGQ6UXG3 332 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 PACS1Q6VY07 963 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 MYLPFQ96A32 169 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 TMA16Q96EY4 203 aaKnown RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 KCTD15Q96SI1 283 aaPredicted RBP11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 PKP2Q99959 881 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 COG4Q9H9E3 785 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 NUDT5Q9UKK9 219 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 AP4E1Q9UPM8 1137 aa11.89□□□□□ -0.51
PPP4R3B-204ENST00000612688 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 GIPC1O14908 333 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 SNNO75324 88 aaPredicted RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 SOAT2O75908 522 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 OXSR1O95747 527 aaPredicted RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 HSPA4LO95757 839 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 IL1BP01584 269 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 JUNP05412 331 aaKnown RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 USP17L7P0C7H9 530 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 RALBP11234 206 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 XRCC1P18887 633 aaPredicted RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 PRKCHP24723 683 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 MPSTP25325 297 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 ITGB8P26012 769 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 RPL9P32969 192 aaKnown RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 YWHAHQ04917 246 aaPredicted RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 LRRC26Q2I0M4 334 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 CLEC20AQ6ZU45 233 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 HFE2Q6ZVN8 426 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 SIX6OS1Q8N1H7 587 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 EDEM1Q92611 657 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 LENG8Q96PV6 779 aaPredicted RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 SORT1Q99523 831 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 NDEL1Q9GZM8 345 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 DTLQ9NZJ0 730 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 C5orf42Q9H799 3197 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 TMEM233B4DJY2 109 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 PHGDHO43175 533 aaKnown RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 AP1G1O43747 822 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 MFSD11O43934 449 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 PLIN3O60664 434 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 FUCA1P04066 466 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 CSF2RAP15509 400 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 NPR3P17342 541 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 AOC1P19801 751 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 CRHR1P34998 444 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 LHX1P48742 406 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 TKTL1P51854 596 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 NR1H2P55055 460 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 BNIP3Q12983 259 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 TGFBIQ15582 683 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 ANO4Q32M45 955 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 PKDCCQ504Y2 493 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 SLC2A7Q6PXP3 512 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 CHST15Q7LFX5 561 aaPredicted RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 OTOP2Q7RTS6 562 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 LILRA2Q8N149 483 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 FBXW8Q8N3Y1 598 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 DNAAF3Q8N9W5 541 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 DQX1Q8TE96 717 aaKnown RBP11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 USP33Q8TEY7 942 aa11.88□□□□□ -0.51
PPP4R3B-204ENST00000612688 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.516e-7■■■■■ 28.6
PPP4R3B-204ENST00000612688 PPWD1Q96BP3 646 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms