RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TK2O00142 265 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 TNFRSF10BO14763 440 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ANXA9O76027 345 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 RPL14P50914 215 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 PRKAA1Q13131 559 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 PRSS55Q6UWB4 352 aaPredicted RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 RNF111Q6ZNA4 994 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ANKS3Q6ZW76 656 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 RAPH1Q70E73 1250 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ARHGAP12Q8IWW6 846 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 DQX1Q8TE96 717 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 PYDC1Q8WXC3 89 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 PPP2R3CQ969Q6 453 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 TRIM43Q96BQ3 446 aaPredicted RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 CELF6Q96J87 481 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 TSNARE1Q96NA8 513 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 OR52B2Q96RD2 323 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 IL12RB2Q99665 862 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 TBL1YQ9BQ87 522 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 CCDC28BQ9BUN5 200 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 SHCBP1LQ9BZQ2 653 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 MRM3Q9HC36 420 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 UBP1Q9NZI7 540 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 PCDH10Q9P2E7 1040 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 CPSF2Q9P2I0 782 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 PDP2Q9P2J9 529 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 PRPF19Q9UMS4 504 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 SSX2IPQ9Y2D8 614 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ABHD14A-ACY1A0A1B0GW23 586 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 PDE5AO76074 875 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 CHRNGP07510 517 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 THRAP10827 490 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 MPSTP25325 297 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ITGB8P26012 769 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 GABRB3P28472 473 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 GRIA4P48058 902 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ERFP50548 548 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ASPHQ12797 758 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 USP10Q14694 798 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 BRMS1LQ5PSV4 323 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 SEL1L3Q68CR1 1132 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 OTOP3Q7RTS5 596 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 PDSS2Q86YH6 399 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 CENPLQ8N0S6 344 aaPredicted RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 NUP93Q8N1F7 819 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 LZTR1Q8N653 840 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 CPSF7Q8N684 471 aaKnown RBP14.85□□□□□ -0.03
CDH1-213ENST00000612417 TTC9BQ8N6N2 239 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 GPR152Q8TDT2 470 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 VWCEQ96DN2 955 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 HAPLN3Q96S86 360 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 ZNF385DQ9H6B1 395 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 CYP4F11Q9HBI6 524 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 VTI1BQ9UEU0 232 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 MIA3Q5JRA6 1907 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 LOC100653049A0A140TA62 436 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 CASQ2O14958 399 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 FGF10O15520 208 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 SOAT2O75908 522 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 KRT34O76011 436 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 AHSGP02765 367 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 ARCN1P48444 511 aaKnown RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 CCNHP51946 323 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 MGAT5BQ3V5L5 792 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 MANEALQ5VSG8 457 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 ARMC3Q5W041 872 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 DENND5AQ6IQ26 1287 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 KIAA1841Q6NSI8 718 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 POTEHQ6S545 545 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 RSPO2Q6UXX9 243 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 RNF19BQ6ZMZ0 732 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 SETD3Q86TU7 594 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 KBTBD6Q86V97 674 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 ATPAF2Q8N5M1 289 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 SLC26A7Q8TE54 656 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 TOP1MTQ969P6 601 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 C8orf48Q96LL4 319 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 LENG8Q96PV6 779 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 SEPT5Q99719 369 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 YIPF3Q9GZM5 350 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 CWH43Q9H720 699 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
CDH1-213ENST00000612417 MAGED2Q9UNF1 606 aaPredicted RBP14.84□□□□□ -0.03
CDH1-213ENST00000612417 RGSL1A5PLK6 1076 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 IRAK2O43187 625 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 SORBS2O94875 1100 aaKnown RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 SNUPNO95149 360 aaKnown RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 LYNP07948 512 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 ACRP10323 421 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 TFEBP19484 476 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 PIK3R1P27986 724 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 MAGEA11P43364 429 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 DEFB103AP81534 67 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 NSUN2Q08J23 767 aaKnown RBP eCLIP14.83□□□□□ -0.03
CDH1-213ENST00000612417 USP41Q3LFD5 358 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 ARL13AQ5H913 290 aaPredicted RBP14.83□□□□□ -0.03
CDH1-213ENST00000612417 ARTNQ5T4W7 220 aa14.83□□□□□ -0.03
CDH1-213ENST00000612417 HPS6Q86YV9 775 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms