RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 RALGPS1Q5JS13 557 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 CERCAMQ5T4B2 595 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 IGDCC3Q8IVU1 814 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 PAF1Q8N7H5 531 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 ZNF366Q8N895 744 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 MYO19Q96H55 970 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 FEM1CQ96JP0 617 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 WDR83Q9BRX9 315 aaKnown RBP17.72■□□□□ 0.43
SREK1-216ENST00000612404 TRPV5Q9NQA5 729 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 SYBUQ9NX95 663 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 CHKBQ9Y259 395 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 TEX264Q9Y6I9 313 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 TTC4O95801 387 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 GSRP00390 522 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 MAPK8P45983 427 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 GALNT3Q14435 633 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 SLC1A5Q15758 541 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 SLC14A2Q15849 920 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 MYLK3Q32MK0 819 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 DENND5AQ6IQ26 1287 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 PALM2Q8IXS6 379 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 UHMK1Q8TAS1 419 aaKnown RBP17.72■□□□□ 0.43
SREK1-216ENST00000612404 DNASE1L2Q92874 299 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 LRRC39Q96DD0 335 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 CFAP36Q96G28 342 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 SIGLEC10Q96LC7 697 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 TDRD1Q9BXT4 1180 aaKnown RBP17.72■□□□□ 0.43
SREK1-216ENST00000612404 FUT8Q9BYC5 575 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 SAMD15Q9P1V8 674 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 ANKRD36A6QL64 1941 aa17.72■□□□□ 0.43
SREK1-216ENST00000612404 LOC285095A0A1B0GVY8 99 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 RIPK2O43353 540 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 PIGNO95427 931 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 CA4P22748 312 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 CCNHP51946 323 aaPredicted RBP17.71■□□□□ 0.43
SREK1-216ENST00000612404 BCL2L1Q07817 233 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 TRAF2Q12933 501 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 SIRPB2Q5JXA9 342 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 TXNDC11Q6PKC3 985 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 DPY19L3Q6ZPD9 716 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 CAMK1DQ8IU85 385 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 FRS2Q8WU20 508 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 ZBTB9Q96C00 473 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 TTC25Q96NG3 672 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 MTG2Q9H4K7 406 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 ZDHHC6Q9H6R6 413 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 ATP13A3Q9H7F0 1226 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 VPS37BQ9H9H4 285 aa17.71■□□□□ 0.43
SREK1-216ENST00000612404 ZC3H7BQ9UGR2 993 aaKnown RBP17.71■□□□□ 0.43
SREK1-216ENST00000612404 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.71■□□□□ 0.42
SREK1-216ENST00000612404 NPY2RP49146 381 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 SLC29A2Q14542 456 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 ZNF234Q14588 700 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 CFAP58Q5T655 872 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 SERPINA13PQ6UXR4 307 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 OR2A12Q8NGT7 310 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 RMDN1Q96DB5 314 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 STAMBPL1Q96FJ0 436 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 EBNA1BP2Q99848 306 aaKnown RBP17.71■□□□□ 0.42
SREK1-216ENST00000612404 IL22Q9GZX6 179 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 ZDHHC4Q9NPG8 344 aa17.71■□□□□ 0.42
SREK1-216ENST00000612404 ARIH1Q9Y4X5 557 aaPredicted RBP17.71■□□□□ 0.42
SREK1-216ENST00000612404 LOC730098B7Z3J9 87 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 NDST3O95803 873 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 EPOP01588 193 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 ATXN1LP0C7T5 689 aaKnown RBP17.7■□□□□ 0.42
SREK1-216ENST00000612404 HLA-DPA1P20036 260 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
SREK1-216ENST00000612404 PFKPQ01813 784 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 RAD51Q06609 339 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 TDGQ13569 410 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 POU6F1Q14863 301 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 RALGPS2Q86X27 583 aaPredicted RBP17.7■□□□□ 0.42
SREK1-216ENST00000612404 CHST14Q8NCH0 376 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 LPCAT1Q8NF37 534 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 TRIB3Q96RU7 358 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 EPB41L4BQ9H329 900 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 C8orf33Q9H7E9 229 aaPredicted RBP17.7■□□□□ 0.42
SREK1-216ENST00000612404 ARNT2Q9HBZ2 717 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 LRRC4CQ9HCJ2 640 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 PCDHB9Q9Y5E1 797 aa17.7■□□□□ 0.42
SREK1-216ENST00000612404 ANTXRLA6NF34 631 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 POP4O95707 220 aaKnown RBP17.69■□□□□ 0.42
SREK1-216ENST00000612404 PDHA1P08559 390 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 HLA-EP13747 358 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 SERPINA4P29622 427 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 CBLBQ13191 982 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 PON2Q15165 354 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 SPDYCQ5MJ68 293 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 SUGP1Q8IWZ8 645 aaKnown RBP17.69■□□□□ 0.42
SREK1-216ENST00000612404 GRIN3AQ8TCU5 1115 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 TRIM56Q9BRZ2 755 aaKnown RBP17.69■□□□□ 0.42
SREK1-216ENST00000612404 ADGRE3Q9BY15 652 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 PLAAQ9Y263 795 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 SASH3O75995 380 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 FGF1P05230 155 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 SSTR1P30872 391 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 SEC13P55735 322 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 FAM193AP78312 1265 aa17.69■□□□□ 0.42
SREK1-216ENST00000612404 EMC10Q5UCC4 262 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms