RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 HMCESQ96FZ2 354 aa18■□□□□ 0.47
SSBP1-215ENST00000612337 ZNF578Q96N58 590 aaPredicted RBP18■□□□□ 0.47
SSBP1-215ENST00000612337 EPAS1Q99814 870 aa18■□□□□ 0.47
SSBP1-215ENST00000612337 AGPAT1Q99943 283 aa18■□□□□ 0.47
SSBP1-215ENST00000612337 C1QTNF7Q9BXJ2 289 aa18■□□□□ 0.47
SSBP1-215ENST00000612337 KLC2Q9H0B6 622 aa18■□□□□ 0.47
SSBP1-215ENST00000612337 SEPT11Q9NVA2 429 aaKnown RBP18■□□□□ 0.47
SSBP1-215ENST00000612337 SPASTQ9UBP0 616 aa18■□□□□ 0.47
SSBP1-215ENST00000612337 ANKRD62A6NC57 917 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 RASA4BC9J798 803 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 TOR1BO14657 336 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 RASA4O43374 803 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 USP12O75317 370 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 CSO75390 466 aaKnown RBP17.99■□□□□ 0.47
SSBP1-215ENST00000612337 TM7SF2O76062 418 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 DXOO77932 396 aaKnown RBP17.99■□□□□ 0.47
SSBP1-215ENST00000612337 TIMP2P16035 220 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 IGFALSP35858 605 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 THOP1P52888 689 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 YPEL5P62699 121 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 UBXN1Q04323 297 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 CCDC173Q0VFZ6 552 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 SERINC3Q13530 473 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 CDKN3Q16667 212 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 DEFB133Q30KQ1 61 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 PARP15Q460N3 678 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 LRRC73Q5JTD7 316 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 VPS36Q86VN1 386 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 CXorf40AQ8TE69 158 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 TBATAQ96M53 351 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 FCRL3Q96P31 734 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-215ENST00000612337 MCEEQ96PE7 176 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 ERGIC2Q96RQ1 377 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 IL12RB2Q99665 862 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 CATSPERBQ9H7T0 1116 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 ANO10Q9NW15 660 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 APOBEC3BQ9UH17 382 aaKnown RBP17.99■□□□□ 0.47
SSBP1-215ENST00000612337 FZD10Q9ULW2 581 aa17.99■□□□□ 0.47
SSBP1-215ENST00000612337 HELZ2Q9BYK8 2649 aaKnown RBP17.99■□□□□ 0.47
SSBP1-215ENST00000612337 EME2A4GXA9 379 aaPredicted RBP17.98■□□□□ 0.47
SSBP1-215ENST00000612337 LRRC10BA6NIK2 292 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 CREB3O43889 395 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 MMP20O60882 483 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 MPOP05164 745 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 TGM2P21980 687 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 LSSP48449 732 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 SUOXP51687 545 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 RPL7AP62424 266 aaKnown RBP17.98■□□□□ 0.47
SSBP1-215ENST00000612337 GABREP78334 506 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 MYL5Q02045 173 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 TLE3Q04726 772 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 PPP1R15BQ5SWA1 713 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 GUSBP11Q6P575 273 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 EFL1Q7Z2Z2 1120 aaKnown RBP17.98■□□□□ 0.47
SSBP1-215ENST00000612337 SPACA3Q8IXA5 215 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 PHACTR4Q8IZ21 702 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 RBFAQ8N0V3 343 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 UMODL1-AS1Q8N2C9 162 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 TP53I13Q8NBR0 393 aaPredicted RBP17.98■□□□□ 0.47
SSBP1-215ENST00000612337 NETO2Q8NC67 525 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 ZNF248Q8NDW4 579 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 TPCN2Q8NHX9 752 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 HIC2Q96JB3 615 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 CNPY3Q9BT09 278 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 BOCQ9BWV1 1114 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 CPEB1Q9BZB8 566 aaKnown RBP17.98■□□□□ 0.47
SSBP1-215ENST00000612337 TCEAL2Q9H3H9 227 aaPredicted RBP17.98■□□□□ 0.47
SSBP1-215ENST00000612337 RP1P56715 2156 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 CFAP46Q8IYW2 2715 aa17.98■□□□□ 0.47
SSBP1-215ENST00000612337 CPED1A4D0V7 1026 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 TK2O00142 265 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 FGF10O15520 208 aaPredicted RBP17.97■□□□□ 0.47
SSBP1-215ENST00000612337 GCATO75600 419 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 ITIH2P19823 946 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 HTR7P34969 479 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 PCBP4P57723 403 aaKnown RBP17.97■□□□□ 0.47
SSBP1-215ENST00000612337 ERVPABLB-1P60509 514 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 NR0B2Q15466 257 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 ISXQ2M1V0 245 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 PRRT3Q5FWE3 981 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 SASS6Q6UVJ0 657 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 MACC1Q6ZN28 852 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 HCAR2Q8TDS4 363 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 GLMNQ92990 594 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 GRAMD1AQ96CP6 724 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 LGMNQ99538 433 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 LRRC61Q9BV99 259 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 POLR1BQ9H9Y6 1135 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 MBNL1Q9NR56 388 aaKnown RBP17.97■□□□□ 0.47
SSBP1-215ENST00000612337 DONSONQ9NYP3 566 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 LHX3Q9UBR4 397 aa17.97■□□□□ 0.47
SSBP1-215ENST00000612337 PNMA8BQ9ULN7 279 aaPredicted RBP17.97■□□□□ 0.47
SSBP1-215ENST00000612337 COL27A1Q8IZC6 1860 aaPredicted RBP17.97■□□□□ 0.47
SSBP1-215ENST00000612337 LMO7DNF2Z398 122 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 INSIG1O15503 277 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 CCDC172P0C7W6 258 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 CDK11BP21127 795 aaKnown RBP17.96■□□□□ 0.47
SSBP1-215ENST00000612337 EIF4A3P38919 411 aaKnown RBP17.96■□□□□ 0.47
SSBP1-215ENST00000612337 RPIAP49247 311 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms