RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PKN3Q6P5Z2 889 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 PGAM4Q8N0Y7 254 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 NPLOC4Q8TAT6 608 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 GPR152Q8TDT2 470 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 OLFM1Q99784 485 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 SLC39A8Q9C0K1 460 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 MRPL46Q9H2W6 279 aaKnown RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 VTA1Q9NP79 307 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 C6orf203Q9P0P8 240 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 PRORSD1PA6NEY8 169 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 VILLO15195 856 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 UBDO15205 165 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 SIX3O95343 332 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 FAM58BPP0C7Q3 252 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 ARNTP27540 789 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 MAPK10P53779 464 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 DYNC1I2Q13409 638 aaKnown RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 CAPRIN1Q14444 709 aaKnown RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 UBXN11Q5T124 520 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 NEPROQ6NW34 567 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 DCBLD1Q8N8Z6 715 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 ANKRD49Q8WVL7 239 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 NT5C3BQ969T7 300 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 B3GALT6Q96L58 329 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 CCT7Q99832 543 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 TMEM79Q9BSE2 394 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 NT5MQ9NPB1 228 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 GDAP2Q9NXN4 497 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 EPS15L1Q9UBC2 864 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 AP4S1Q9Y587 144 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 COMMD3-BMI1R4GMX3 469 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 ARHGEF37A1IGU5 675 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 HMBSP08397 361 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 CPB1P15086 417 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 PSMC3P17980 439 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 ARL1P40616 181 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 PNPLA4P41247 253 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 GRIA3P42263 894 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 MAGEA12P43365 314 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 SLC7A2P52569 658 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 CSE1LP55060 971 aaKnown RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 PLIN5Q00G26 463 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 LSAMPQ13449 338 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 DBN1Q16643 649 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 SCIMPQ6UWF3 145 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 PPHLN1Q8NEY8 458 aaKnown RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 TINF2Q9BSI4 451 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 PREBQ9HCU5 417 aa14.18□□□□□ -0.14
COL6A1-207ENST00000612273 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-207ENST00000612273 PSMD12O00232 456 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 PLOD2O00469 737 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 HLA-DQB2P05538 268 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 CD151P48509 253 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 SULT2A1Q06520 285 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 PCID2Q5JVF3 399 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 GPR158Q5T848 1215 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 GPR142Q7Z601 462 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 MYLPFQ96A32 169 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 DGCR14Q96DF8 476 aaKnown RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 SLC2A13Q96QE2 648 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 PRPF19Q9UMS4 504 aaKnown RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 CCL15-CCL14A0A0B4J2E2 113 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 NR5A2O00482 541 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 TADA2AO75478 443 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 KCNC1P48547 511 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 YBX1P67809 324 aaKnown RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 PLOD1Q02809 727 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 GALNT2Q10471 571 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 PPIL2Q13356 520 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 CCL15Q16663 113 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 HERC6Q8IVU3 1022 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 DDIASQ8IXT1 998 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 SNRNP27Q8WVK2 155 aaKnown RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 HDAC11Q96DB2 347 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 MAML3Q96JK9 1138 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 PRICKLE1Q96MT3 831 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 DCUN1D5Q9BTE7 237 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 MID2Q9UJV3 735 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 DERAQ9Y315 318 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 BTBD19C9JJ37 291 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 MRASO14807 208 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 TSPAN3O60637 253 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 MFSD10Q14728 455 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 MGAT5BQ3V5L5 792 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 CUZD1Q86UP6 607 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 ESAMQ96AP7 390 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 FCRL2Q96LA5 508 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-207ENST00000612273 BTBD9Q96Q07 612 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 TMLHEQ9NVH6 421 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 GTF2IRD1Q9UHL9 959 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 TRHDEQ9UKU6 1024 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 BTRCQ9Y297 605 aa14.17□□□□□ -0.14
COL6A1-207ENST00000612273 NCF1BA6NI72 391 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-207ENST00000612273 NCF1CA8MVU1 366 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-207ENST00000612273 CASQ2O14958 399 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-207ENST00000612273 PAGE1O75459 146 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 NCF1P14598 390 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-207ENST00000612273 TMED1Q13445 227 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 BTBD8Q5XKL5 378 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms