RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 STEAP4Q687X5 459 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 FAM117BQ6P1L5 589 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CYP2R1Q6VVX0 501 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ZNF534Q76KX8 674 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CUZD1Q86UP6 607 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 STAG3L4Q8TBR4 150 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 MZB1Q8WU39 189 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 HIC2Q96JB3 615 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GPR22Q99680 433 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 DRC3Q9H069 523 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PAPOLBQ9NRJ5 636 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 CD274Q9NZQ7 290 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PRPF19Q9UMS4 504 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 NAV1Q8NEY1 1877 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 E9PAM4 449 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 H7C4K7 107 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GABRDO14764 452 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 DLX3O60479 287 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 BAIAP3O94812 1187 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 AHSGP02765 367 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ZNF865P0CJ78 1059 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 HSPA13P48723 471 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 NME5P56597 212 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CDH18Q13634 790 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PTPRNQ16849 979 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CMPK2Q5EBM0 449 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PTRHD1Q6GMV3 140 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 NPWQ8N729 165 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ZNF778Q96MU6 729 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 BEGAINQ9BUH8 593 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 KIFC1Q9BW19 673 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 TRPC7Q9HCX4 862 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CASS4Q9NQ75 786 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CDH22Q9UJ99 828 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 TSR3Q9UJK0 312 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 GNGT2O14610 69 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ALDH1A2O94788 518 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 SNUPNO95149 360 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 SOX11P35716 441 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 AFF1P51825 1210 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 HK2P52789 917 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 DSC2Q02487 901 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 SLC10A7Q0GE19 358 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 RINLQ6ZS11 566 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PHTF2Q8N3S3 785 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 RIN3Q8TB24 985 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GPR152Q8TDT2 470 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GIPC2Q8TF65 315 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 OR52B2Q96RD2 323 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 NR1H4Q96RI1 486 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 SGIP1Q9BQI5 828 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CCDC28BQ9BUN5 200 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 LSM7Q9UK45 103 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 PSMD13Q9UNM6 376 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 SLC27A5Q9Y2P5 690 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 NCF1BA6NI72 391 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 NCF1CA8MVU1 366 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 PRRG1O14668 218 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GABBR2O75899 941 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 NCF1P14598 390 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 PBX3P40426 434 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 IDH3AP50213 366 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 RAP1GDS1P52306 607 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 MTA1Q13330 715 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 DPYSQ14117 519 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PCLAFQ15004 111 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PFKFB4Q16877 469 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 TSTD2Q5T7W7 516 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 PDZD8Q8NEN9 1154 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CASP10Q92851 521 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 EXOC2Q96KP1 924 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 HAUS8Q9BT25 410 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 MAST2Q6P0Q8 1798 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 THSD7AQ9UPZ6 1657 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 A0A087X1B8 175 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ELNP15502 786 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ITGALP20701 1170 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 HMOX2P30519 316 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CDC16Q13042 620 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PEX6Q13608 980 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 FRG1Q14331 258 aaKnown RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 IYDQ6PHW0 289 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ZBTB49Q6ZSB9 765 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CLYBLQ8N0X4 340 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PQLC1Q8N2U9 271 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 STYXQ8WUJ0 223 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 HEXDCQ8WVB3 486 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ZNF570Q96NI8 536 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 TSGA13Q96PP4 275 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 MRPL9Q9BYD2 267 aaKnown RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 COPS7BQ9H9Q2 264 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 PKP3Q9Y446 797 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 MATN2O00339 956 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 GM2AP17900 193 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 MSX2P35548 267 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 SLC1A2P43004 574 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 FBXL22Q6P050 247 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ARNTL2Q8WYA1 636 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CNDP1Q96KN2 507 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ASB2Q96Q27 587 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms