RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CCL22O00626 93 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 ZNF195O14628 629 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 MUSKO15146 869 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 ENTPD5O75356 428 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 H2AFYO75367 372 aaKnown RBP13.74□□□□□ -0.21
NEK3-205ENST00000610828 CXCL10P02778 98 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 COL6A2P12110 1019 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 CRABP2P29373 138 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 SLC11A2P49281 568 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 TAS2R39P59534 338 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 TNK2Q07912 1038 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
NEK3-205ENST00000610828 ZNF789Q5FWF6 425 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 RBM20Q5T481 1227 aaKnown RBP13.74□□□□□ -0.21
NEK3-205ENST00000610828 LIPMQ5VYY2 423 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 IL31Q6EBC2 164 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 PTAR1Q7Z6K3 402 aaPredicted RBP13.74□□□□□ -0.21
NEK3-205ENST00000610828 LCA5Q86VQ0 697 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 DENND1CQ8IV53 801 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 PNPLA1Q8N8W4 532 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 OR6P1Q8NGX9 317 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 FBXO27Q8NI29 283 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 IFT43Q96FT9 208 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 NDNQ99608 321 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 VN1R3Q9BXE9 311 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 CDH19Q9H159 772 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 ZFP37Q9Y6Q3 630 aaPredicted RBP13.74□□□□□ -0.21
NEK3-205ENST00000610828 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 CHRNGP07510 517 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 ALOX15P16050 662 aaPredicted RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 GRIA4P48058 902 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 PRAMEP78395 509 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 PREPLQ4J6C6 727 aaPredicted RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 RABGAP1LQ5R372 815 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 WASHC2DQ5SRD0 308 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 HECTD3Q5T447 861 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 WLSQ5T9L3 541 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 KIAA0408Q6ZU52 694 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 TMPRSS6Q8IU80 811 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 TDRD5Q8NAT2 981 aaKnown RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 RBM15BQ8NDT2 890 aaKnown RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 PDZD8Q8NEN9 1154 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 GABPB2Q8TAK5 448 aaPredicted RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 STYXQ8WUJ0 223 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 IGSF21Q96ID5 467 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 PAK6Q9NQU5 681 aaPredicted RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 SORCS3Q9UPU3 1222 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 ACTL7AQ9Y615 435 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 LOC285095A0A1B0GVY8 99 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 ZNF840PA6NDX5 716 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 COCHO43405 550 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 PEX11AO75192 247 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 KLHL2O95198 593 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 PAPSS2O95340 614 aaPredicted RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 ANP32DO95626 131 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 ATXN1LP0C7T5 689 aaKnown RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 NAGLUP54802 743 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 RPS24P62847 133 aaKnown RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 POU4F1Q01851 419 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 DLG1Q12959 904 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 SPOUT1Q5T280 376 aaKnown RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 OR7D4Q8NG98 312 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 TTC8Q8TAM2 541 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 HDAC10Q969S8 669 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 TADA1Q96BN2 335 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 OMDQ99983 421 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 CLSTN3Q9BQT9 956 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 ILKAPQ9H0C8 392 aaPredicted RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
NEK3-205ENST00000610828 NOP53Q9NZM5 478 aaKnown RBP13.73□□□□□ -0.21
NEK3-205ENST00000610828 MROH6A6NGR9 719 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 SEC24AO95486 1093 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 AOC1P19801 751 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
NEK3-205ENST00000610828 PGM1P36871 562 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 CCR10P46092 362 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 ARSDP51689 593 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 MXRA7P84157 204 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 GNA12Q03113 381 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 GALNT3Q14435 633 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 TAF12Q16514 161 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 ARMC3Q5W041 872 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 LDB1Q86U70 411 aaPredicted RBP13.72□□□□□ -0.21
NEK3-205ENST00000610828 CILP2Q8IUL8 1156 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 OR52K2Q8NGK3 314 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 BLOC1S5Q8TDH9 187 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 GPR78Q96P69 363 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 CWH43Q9H720 699 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 RNPEPL1Q9HAU8 725 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 PDFQ9HBH1 243 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 CYP4F11Q9HBI6 524 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 GKN1Q9NS71 199 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 NKX1-2Q9UD57 310 aaPredicted RBP13.72□□□□□ -0.21
NEK3-205ENST00000610828 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
NEK3-205ENST00000610828 KCTD3Q9Y597 815 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms