RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 OR13J1Q8NGT2 312 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 SEMA3CQ99985 751 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 NACA2Q9H009 215 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 CDH19Q9H159 772 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 OGDHLQ9ULD0 1010 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 ZNF840PA6NDX5 716 aa28.29■■■□□ 2.12
CSPG5-205ENST00000610462 ATXN1LP0C7T5 689 aaKnown RBP28.29■■■□□ 2.12
CSPG5-205ENST00000610462 SLC11A2P49281 568 aa28.29■■■□□ 2.12
CSPG5-205ENST00000610462 ATN1P54259 1190 aaPredicted RBP28.29■■■□□ 2.12
CSPG5-205ENST00000610462 TAS2R39P59534 338 aa28.29■■■□□ 2.12
CSPG5-205ENST00000610462 ZNF235Q14590 738 aa28.29■■■□□ 2.12
CSPG5-205ENST00000610462 ZNF460Q14592 562 aa28.29■■■□□ 2.12
CSPG5-205ENST00000610462 FSTL5Q8N475 847 aaPredicted RBP28.29■■■□□ 2.12
CSPG5-205ENST00000610462 GPATCH11Q8N954 259 aa28.29■■■□□ 2.12
CSPG5-205ENST00000610462 IGSF21Q96ID5 467 aa28.29■■■□□ 2.12
CSPG5-205ENST00000610462 AFF4Q9UHB7 1163 aaKnown RBP28.29■■■□□ 2.12
CSPG5-205ENST00000610462 A0A087X1B8 175 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 PRR5-ARHGAP8B1AHC4 643 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 GJB5O95377 273 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 MYL4P12829 197 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 EZRP15311 586 aaKnown RBP28.28■■■□□ 2.12
CSPG5-205ENST00000610462 ARHGAP8P85298 464 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 HECTD3Q5T447 861 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 KLHDC10Q6PID8 442 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 ANKRD33Q7Z3H0 272 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 ZNF781Q8N8C0 355 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 GPR78Q96P69 363 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 MAGEH1Q9H213 219 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 CAMSAP3Q9P1Y5 1249 aaPredicted RBP28.28■■■□□ 2.12
CSPG5-205ENST00000610462 B2RBV5 119 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 TARM1B6A8C7 271 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 KLHL2O95198 593 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 AOC1P19801 751 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 GLRBP48167 497 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 LEPRP48357 1165 aaKnown RBP28.28■■■□□ 2.12
CSPG5-205ENST00000610462 UBAP2LQ14157 1087 aaKnown RBP28.28■■■□□ 2.12
CSPG5-205ENST00000610462 RCN2Q14257 317 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 TSNAXIP1Q2TAA8 658 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 CNSTQ6PJW8 725 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 MCUR1Q96AQ8 359 aa28.28■■■□□ 2.12
CSPG5-205ENST00000610462 DENND2DQ9H6A0 471 aaPredicted RBP28.28■■■□□ 2.12
CSPG5-205ENST00000610462 SPECC1L-ADORA2AF8WAN1 911 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 SLC7A4O43246 635 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 SEC24AO95486 1093 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 CPA2P48052 419 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 SLC12A2P55011 1212 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 KIAA1841Q6NSI8 718 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 GALNT7Q86SF2 657 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 TMPRSS6Q8IU80 811 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 NXNL1Q96CM4 212 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 FEM1CQ96JP0 617 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 OMDQ99983 421 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 MMADHCQ9H3L0 296 aaPredicted RBP28.27■■■□□ 2.12
CSPG5-205ENST00000610462 ZFP37Q9Y6Q3 630 aaPredicted RBP28.27■■■□□ 2.12
CSPG5-205ENST00000610462 AURKAO14965 403 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 MUSKO15146 869 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 PEX11AO75192 247 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 HMGA1P17096 107 aaKnown RBP28.27■■■□□ 2.12
CSPG5-205ENST00000610462 CDH4P55283 916 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 GNA12Q03113 381 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 DLG1Q12959 904 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 IFT43Q96FT9 208 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 CLSTN3Q9BQT9 956 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 DRC3Q9H069 523 aa28.27■■■□□ 2.12
CSPG5-205ENST00000610462 A0A0D9SEW6 157 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 COCHO43405 550 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 HOXD9P28356 352 aaPredicted RBP28.26■■■□□ 2.11
CSPG5-205ENST00000610462 CLCN5P51795 746 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 USP4Q13107 963 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 BTG3Q14201 252 aaPredicted RBP28.26■■■□□ 2.11
CSPG5-205ENST00000610462 PLD4Q96BZ4 506 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 MFSD1Q9H3U5 465 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 HSFX1Q9UBD0 423 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 XPR1Q9UBH6 696 aa28.26■■■□□ 2.11
CSPG5-205ENST00000610462 GJB3O75712 270 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 GM2AP17900 193 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 HLA-DPA1P20036 260 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 GRIA4P48058 902 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 RBM20Q5T481 1227 aaKnown RBP28.25■■■□□ 2.11
CSPG5-205ENST00000610462 VWA5B1Q5TIE3 1220 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 ALG1LQ6GMV1 187 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 EPGNQ6UW88 154 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 SLC39A5Q6ZMH5 540 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 TDRD5Q8NAT2 981 aaKnown RBP28.25■■■□□ 2.11
CSPG5-205ENST00000610462 ILKAPQ9H0C8 392 aaPredicted RBP28.25■■■□□ 2.11
CSPG5-205ENST00000610462 H3BNC9 293 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 LDB2O43679 373 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 EPOP01588 193 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 FGF1P05230 155 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 KDSRQ06136 332 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 ZNF789Q5FWF6 425 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 DENND1CQ8IV53 801 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 OR7D4Q8NG98 312 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 ZNF461Q8TAF7 563 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 COG4Q9H9E3 785 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 EBF2Q9HAK2 575 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 RNPEPL1Q9HAU8 725 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 NOP53Q9NZM5 478 aaKnown RBP28.25■■■□□ 2.11
CSPG5-205ENST00000610462 TRPM5Q9NZQ8 1165 aa28.25■■■□□ 2.11
CSPG5-205ENST00000610462 RAP2CQ9Y3L5 183 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms