RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TEX44Q53QW1 395 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 ALG1LQ6GMV1 187 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 PARS2Q7L3T8 475 aaKnown RBP14.41□□□□□ -0.1
CTSA-219ENST00000607841 SLC13A5Q86YT5 568 aaPredicted RBP14.41□□□□□ -0.1
CTSA-219ENST00000607841 CAMK1DQ8IU85 385 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 SLC35F6Q8N357 371 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 DEFB119Q8N690 84 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 MAIP1Q8WWC4 291 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 HTR3CQ8WXA8 447 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 HSPA12BQ96MM6 686 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 QKIQ96PU8 341 aaKnown RBP eCLIP14.41□□□□□ -0.1
CTSA-219ENST00000607841 SEMA3CQ99985 751 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 FRMD8P1Q9BZ68 369 aaPredicted RBP14.41□□□□□ -0.1
CTSA-219ENST00000607841 NOD2Q9HC29 1040 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 NCDNQ9UBB6 729 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 USP27XA6NNY8 438 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 RNF103O00237 685 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 PLK4O00444 970 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 ENC1O14682 589 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 AP1G1O43747 822 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 STK10O94804 968 aaKnown RBP14.4□□□□□ -0.1
CTSA-219ENST00000607841 EPN2O95208 641 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 HLA-DQB2P05538 268 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 SERPINF2P08697 491 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 PTGER3P43115 390 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 CREB5Q02930 508 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 ZBTB17Q13105 803 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 KIAA0895LQ68EN5 471 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 ERAP2Q6P179 960 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 DARS2Q6PI48 645 aaKnown RBP14.4□□□□□ -0.1
CTSA-219ENST00000607841 ARMCX6Q7L4S7 300 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 CYP2U1Q7Z449 544 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 ZSCAN30Q86W11 494 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 RGL4Q8IZJ4 473 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 RUBCNQ92622 972 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 VOPP1Q96AW1 172 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 PBKQ96KB5 322 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 TEKT5Q96M29 485 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 AGAP3Q96P47 875 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 C6orf106Q9H6K1 298 aaPredicted RBP14.4□□□□□ -0.1
CTSA-219ENST00000607841 KCND1Q9NSA2 647 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 KLHL8Q9P2G9 620 aaPredicted RBP14.4□□□□□ -0.1
CTSA-219ENST00000607841 TRHDEQ9UKU6 1024 aa14.4□□□□□ -0.1
CTSA-219ENST00000607841 TSPAN11A1L157 253 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 TTC24A2A3L6 582 aaPredicted RBP14.39□□□□□ -0.11
CTSA-219ENST00000607841 BCLAF3A2AJT9 711 aaKnown RBP14.39□□□□□ -0.11
CTSA-219ENST00000607841 PRR23AA6NEV1 266 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 NEMP1O14524 444 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 TSPAN6O43657 245 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 CEP104O60308 925 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 GJB3O75712 270 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 FSBPO95073 299 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 PCDH8O95206 1070 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 GNSP15586 552 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 PTPN3P26045 913 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 RBL1P28749 1068 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 HOXD12P35452 270 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 NUDT1P36639 197 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 CCR5P51681 352 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 TAS2R38P59533 333 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 GNG11P61952 73 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 DSC2Q02487 901 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 ELP6Q0PNE2 266 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 UGP2Q16851 508 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 B4GALNT4Q76KP1 1039 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 PID1Q7Z2X4 250 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 RABEPKQ7Z6M1 372 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 PRPF39Q86UA1 669 aaKnown RBP14.39□□□□□ -0.11
CTSA-219ENST00000607841 SYT12Q8IV01 421 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 SLC41A1Q8IVJ1 513 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 NDUFAF2Q8N183 169 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 CNTD1Q8N815 330 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 PDCD6IPQ8WUM4 868 aaKnown RBP14.39□□□□□ -0.11
CTSA-219ENST00000607841 DNASE2BQ8WZ79 361 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 SPOCK2Q92563 424 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 BIRC7Q96CA5 298 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 ECHDC3Q96DC8 303 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 FEM1CQ96JP0 617 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 HINFPQ9BQA5 517 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 SLC25A51Q9H1U9 297 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 SUSD2Q9UGT4 822 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 ZKSCAN5Q9Y2L8 839 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.39□□□□□ -0.11
CTSA-219ENST00000607841 PCDHGC4Q9Y5F7 938 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 RAI2Q9Y5P3 530 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 FADS3Q9Y5Q0 445 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 CACNA1HO95180 2353 aa14.39□□□□□ -0.11
CTSA-219ENST00000607841 NYNRINQ9P2P1 1898 aaKnown RBP14.38□□□□□ -0.11
CTSA-219ENST00000607841 NUP205Q92621 2012 aa14.38□□□□□ -0.11
CTSA-219ENST00000607841 UPK3BL1B0FP48 263 aa14.38□□□□□ -0.11
CTSA-219ENST00000607841 UPK3BL2E5RIL1 263 aa14.38□□□□□ -0.11
CTSA-219ENST00000607841 TRAFD1O14545 582 aaPredicted RBP14.38□□□□□ -0.11
CTSA-219ENST00000607841 HTRA2O43464 458 aaPredicted RBP14.38□□□□□ -0.11
CTSA-219ENST00000607841 RNGTTO60942 597 aaKnown RBP14.38□□□□□ -0.11
CTSA-219ENST00000607841 LRP3O75074 770 aa14.38□□□□□ -0.11
CTSA-219ENST00000607841 FGGP02679 453 aa14.38□□□□□ -0.11
CTSA-219ENST00000607841 TIMP2P16035 220 aa14.38□□□□□ -0.11
CTSA-219ENST00000607841 CXCR5P32302 372 aa14.38□□□□□ -0.11
CTSA-219ENST00000607841 RPS21P63220 83 aaKnown RBP14.38□□□□□ -0.11
CTSA-219ENST00000607841 WASHC5Q12768 1159 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms