RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PAGE2Q7Z2X7 111 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 FRMD5Q7Z6J6 570 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 TTC7BQ86TV6 843 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 ATCAYQ86WG3 371 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 TAMM41Q96BW9 452 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 TOX2Q96NM4 488 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 FAM129BQ96TA1 746 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZNF717Q9BY31 904 aaPredicted RBP5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 KLHL25Q9H0H3 589 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 L2HGDHQ9H9P8 463 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 SYBUQ9NX95 663 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 LRFN1Q9P244 771 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 RPH3ALQ9UNE2 315 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 MRPS2Q9Y399 296 aaKnown RBP5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 NR2E1Q9Y466 385 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 NPFFR2Q9Y5X5 522 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 SBF1O95248 1867 aa5.89□□□□□ -1.47
COL4A3BP-207ENST00000604926 OR5K3A6NET4 321 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 POTECB2RU33 542 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 PGRMC2O15173 223 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 PTPREP23469 700 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 DGKEP52429 567 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 EMP3P54852 163 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 C1QTNF8P60827 252 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 TNFRSF17Q02223 184 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 CLCA4Q14CN2 919 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 SLFN12LQ6IEE8 588 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 EFL1Q7Z2Z2 1120 aaKnown RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 CACNA2D4Q7Z3S7 1137 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 RIOX2Q8IUF8 465 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 OFCC1Q8IZS5 231 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 MINDY2Q8NBR6 621 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ROBO4Q8WZ75 1007 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 THRSPQ92748 146 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 C5orf34Q96MH7 638 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 NEURL2Q9BR09 285 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZSCAN5AQ9BUG6 496 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 SLC25A23Q9BV35 468 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 POTEKPQ9BYX7 375 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ACTR10Q9NZ32 417 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 IL20RAQ9UHF4 553 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ENPP5Q9UJA9 477 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 SNX7Q9UNH6 387 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 PLCL2Q9UPR0 1127 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 A0A1W2PRG0 241 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 BCLAF3A2AJT9 711 aaKnown RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 FAM205CA6NFA0 338 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 OR6C70A6NIJ9 312 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 A6NL46 340 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 AKR7A3O95154 331 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 CD63P08962 238 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 HBQ1P09105 142 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 TMIGD3P0DMS9 266 aaPredicted RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 CYP2B6P20813 491 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ICAM3P32942 547 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 EPHB4P54760 987 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 NR6A1Q15406 480 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 LTB4RQ15722 352 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 FAM98BQ52LJ0 330 aaKnown RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 XKR4Q5GH76 650 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 TOR1AIP1Q5JTV8 583 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 BRMS1LQ5PSV4 323 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 SLC9C2Q5TAH2 1124 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ERN2Q76MJ5 926 aaKnown RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 OVCH2Q7RTZ1 564 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 SZRD1Q7Z422 152 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 LIX1Q8N485 282 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 LRRN4CLQ8ND94 238 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ACTRT2Q8TDY3 377 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 CA5BP1Q8WTZ4 195 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 SLC13A3Q8WWT9 602 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 DDX17Q92841 729 aaKnown RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZNF558Q96NG5 402 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 INPP4AQ96PE3 977 aaPredicted RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 OSMRQ99650 979 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 THUMPD3Q9BV44 507 aaKnown RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 C6orf62Q9GZU0 229 aaPredicted RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 OPN3Q9H1Y3 402 aaPredicted RBP5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 ST6GALNAC4Q9H4F1 302 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 TCF7L1Q9HCS4 588 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 DMRT3Q9NQL9 472 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 TMEM39AQ9NV64 488 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 VPS54Q9P1Q0 977 aa5.88□□□□□ -1.47
COL4A3BP-207ENST00000604926 MYBBP1AQ9BQG0 1328 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CCDC154A6NI56 674 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 SRRM3A6NNA2 597 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 KPNA7A9QM74 516 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 EIF3DO15371 548 aaKnown RBP eCLIP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 SLC16A6O15403 523 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 GAAP10253 952 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 GMFBP60983 142 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 NAA20P61599 178 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MC1RQ01726 317 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TLE2Q04725 743 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 COL13A1Q5TAT6 717 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 FAM171A1Q5VUB5 890 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MLIPQ5VWP3 458 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C1orf94Q6P1W5 598 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DARS2Q6PI48 645 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms