RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PHKG1Q16816 387 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CEP85Q6P2H3 762 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 NFRKBQ6P4R8 1299 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 C1orf186Q6ZWK4 172 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 TRPM8Q7Z2W7 1104 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 TRIM59Q8IWR1 403 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 FMR1NBQ8N0W7 255 aaPredicted RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 SH2D3CQ8N5H7 860 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CPSF7Q8N684 471 aaKnown RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CCDC197Q8NCU1 140 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 PIK3C3Q8NEB9 887 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 SHCBP1Q8NEM2 672 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC22A18Q96BI1 424 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 FEM1CQ96JP0 617 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 OSMRQ99650 979 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CDK19Q9BWU1 502 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 NFKBIZQ9BYH8 718 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 PHAXQ9H814 394 aaKnown RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 ARHGEF3Q9NR81 526 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM114A2Q9NRY5 505 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 OXSMQ9NWU1 459 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 UCKL1Q9NWZ5 548 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 OR6C2Q9NZP2 312 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 SELENONQ9NZV5 590 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CNIH4Q9P003 139 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 IFNKQ9P0W0 207 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 EXTL2Q9UBQ6 330 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 KCNN3Q9UGI6 736 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 GPN3Q9UHW5 284 aaPredicted RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CNOT11Q9UKZ1 510 aaKnown RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CNOT6Q9ULM6 557 aaKnown RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CLDN16Q9Y5I7 305 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 A0A087WWV3 80 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 FUOMA2VDF0 154 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 NFKBIEO00221 500 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CXCL11O14625 94 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 HEXIM1O94992 359 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 KRT75O95678 551 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CHN1P15882 459 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CRABP2P29373 138 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PIP4K2AP48426 406 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SMCPP49901 116 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 HUNKP57058 714 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PPP2R2BQ00005 443 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CHRNEQ04844 493 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ST3GAL1Q11201 340 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 DAG1Q14118 895 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 KRT24Q2M2I5 525 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PLA1AQ53H76 456 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 EMBQ6PCB8 327 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 UNC13DQ70J99 1090 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 MICU3Q86XE3 530 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 RASGEF1CQ8N431 466 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 POU5F2Q8N7G0 328 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 OR8J1Q8NGP2 316 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 OR8K3Q8NH51 312 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF707Q96C28 371 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 HDAC11Q96DB2 347 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PTCHD1Q96NR3 888 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 RAB3IPQ96QF0 476 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 MIPEPQ99797 713 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 KIFC3Q9BVG8 833 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 NUSAP1Q9BXS6 441 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SERINC1Q9NRX5 453 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 GIN1Q9NXP7 522 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CYP39A1Q9NYL5 469 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SPASTQ9UBP0 616 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 DBF4Q9UBU7 674 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 TSPYL4Q9UJ04 414 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 RPL26L1Q9UNX3 145 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CBY1Q9Y3M2 126 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SNX14Q9Y5W7 946 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CYP46A1Q9Y6A2 500 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SPATA31A3Q5VYP0 1347 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 MFSD2BA6NFX1 497 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SIGLEC16A6NMB1 481 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 GOLGA8RI6L899 631 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SCAMP2O15127 329 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ATP2C2O75185 946 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 HLA-DRAP01903 254 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 STAG3L3P0CL85 134 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 TXNP10599 105 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SELLP14151 372 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PRKCAP17252 672 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 AGXTP21549 392 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 FGFR2P21802 821 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 GLRA2P23416 452 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 AHCYP23526 432 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 TM4SF1P30408 202 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ARL3P36405 182 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 EIF2B2P49770 351 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF81P51508 661 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 BCAP31P51572 246 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ARSEP51690 589 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PRRX1P54821 245 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 NCALDP61601 193 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 KRT76Q01546 638 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 GOLGA8FQ08AF8 430 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 GOLGA8DPQ0D2H9 430 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms