RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 FCHO2Q0JRZ9 810 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 LRRC14Q15048 493 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 ALG1LQ6GMV1 187 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 DENND5AQ6IQ26 1287 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 PPP1R21Q6ZMI0 780 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 ADIPOR2Q86V24 386 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 CCDC117Q8IWD4 279 aaPredicted RBP17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 SFTPA1Q8IWL2 248 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 PARP9Q8IXQ6 854 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 CHFRQ96EP1 664 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 C2orf49Q9BVC5 232 aaPredicted RBP17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 TM6SF2Q9BZW4 377 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 PHACTR1Q9C0D0 580 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 POLR1EQ9GZS1 481 aaKnown RBP17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 LRRC40Q9H9A6 602 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 NOD2Q9HC29 1040 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 XAB2Q9HCS7 855 aaKnown RBP17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 CASS4Q9NQ75 786 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 GTSE1Q9NYZ3 720 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 CD207Q9UJ71 328 aa17.55■□□□□ 0.4
PPFIA3-207ENST00000602716 TPH1P17752 444 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 KCNA5P22460 613 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 SERPINH1P50454 418 aaKnown RBP17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 CDK16Q00536 496 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 PRPSAP1Q14558 356 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 EFTUD2Q15029 972 aaKnown RBP eCLIP17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 TRPM8Q7Z2W7 1104 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 ETFBKMTQ8IXQ9 262 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 OR6K2Q8NGY2 324 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 MGARPQ8TDB4 240 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 DYDC1Q8WWB3 177 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 CFAP36Q96G28 342 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 TBL1YQ9BQ87 522 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 ANTXRLA6NF34 631 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 ZNF821O75541 412 aaPredicted RBP17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 PLK1P53350 603 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 GEMP55040 296 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 SF3A3Q12874 501 aaKnown RBP eCLIP17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 RFTN1Q14699 578 aaPredicted RBP17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 SMAD1Q15797 465 aaKnown RBP17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 CERCAMQ5T4B2 595 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 MFSD6LQ8IWD5 586 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 ATP2A3Q93084 1043 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 ECT2Q9H8V3 914 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 CD248Q9HCU0 757 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 NUMBLQ9Y6R0 609 aa17.54■□□□□ 0.4
PPFIA3-207ENST00000602716 FOXO6A8MYZ6 492 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 TCP11X1B4DZS4 312 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 INSIG1O15503 277 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 TULP3O75386 442 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 ANXA9O76027 345 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 NFATC1O95644 943 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 ADH1CP00326 375 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 CISD3P0C7P0 127 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 SCNN1BP51168 640 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 MPP2Q14168 576 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 SNCBQ16143 134 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 PRPF38BQ5VTL8 546 aaKnown RBP17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 CYP4X1Q8N118 509 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 PYROXD1Q8WU10 500 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 CKAP2Q8WWK9 683 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 GUCD1Q96NT3 240 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 CDX2Q99626 313 aaPredicted RBP17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 TNKS2Q9H2K2 1166 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 VPS37BQ9H9H4 285 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 FBXO10Q9UK96 956 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 AAR2Q9Y312 384 aaKnown RBP17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 MAD1L1Q9Y6D9 718 aa17.53■□□□□ 0.4
PPFIA3-207ENST00000602716 ERI2A8K979 691 aaKnown RBP17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 MLNP12872 115 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 SRCP12931 536 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 KDSRQ06136 332 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 KIAA0907Q7Z7F0 614 aaPredicted RBP17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 SLC25A41Q8N5S1 370 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 KIAA1958Q8N8K9 716 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 DNAAF3Q8N9W5 541 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 CYB5D2Q8WUJ1 264 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 NXPE3Q969Y0 559 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 ELSPBP1Q96BH3 223 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 SMIM14Q96QK8 99 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 FSD1LQ9BXM9 530 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 FRMD8Q9BZ67 464 aaPredicted RBP17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 UBE2ZQ9H832 354 aaPredicted RBP17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 ABCF3Q9NUQ8 709 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 FGFR1OP2Q9NVK5 253 aa17.52■□□□□ 0.4
PPFIA3-207ENST00000602716 CDH16O75309 829 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 PRKCGP05129 697 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 ABHD2P08910 425 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 BRAFP15056 766 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 PSMC3P17980 439 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 GDI1P31150 447 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 GKP32189 559 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 DGKGP49619 791 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 RHOAP61586 193 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 CBLBQ13191 982 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 MPP3Q13368 585 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 HTR4Q13639 388 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 STAT4Q14765 748 aa17.52■□□□□ 0.39
PPFIA3-207ENST00000602716 INO80DQ53TQ3 878 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms