RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 APOBEC3BQ9UH17 382 aaKnown RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 SALL4Q9UJQ4 1053 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 GCN1Q92616 2671 aaKnown RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 RASA4BC9J798 803 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 TPP1O14773 563 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 CCP110O43303 1012 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 RASA4O43374 803 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 CREB3O43889 395 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 GCATO75600 419 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 TM7SF2O76062 418 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 TIMP2P16035 220 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 LSSP48449 732 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 COPB1P53618 953 aaKnown RBP13.32□□□□□ -0.28
RPS28-204ENST00000602140 PCBP4P57723 403 aaKnown RBP13.32□□□□□ -0.28
RPS28-204ENST00000602140 YBEYP58557 167 aaPredicted RBP13.32□□□□□ -0.28
RPS28-204ENST00000602140 RHOAP61586 193 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 CXADRP78310 365 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 C1orf61Q13536 156 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 NR0B2Q15466 257 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 ISXQ2M1V0 245 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 KLHL40Q2TBA0 621 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 INO80DQ53TQ3 878 aaPredicted RBP13.32□□□□□ -0.28
RPS28-204ENST00000602140 PRRT3Q5FWE3 981 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 DNAJC24Q6P3W2 148 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 MON1BQ7L1V2 547 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 GPR155Q7Z3F1 870 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 PHACTR4Q8IZ21 702 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 NEK11Q8NG66 645 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 CASKIN2Q8WXE0 1202 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 HIC2Q96JB3 615 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 WRAP53Q9BUR4 548 aaKnown RBP13.32□□□□□ -0.28
RPS28-204ENST00000602140 C1QTNF7Q9BXJ2 289 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 POLR1BQ9H9Y6 1135 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 MBNL1Q9NR56 388 aaKnown RBP13.32□□□□□ -0.28
RPS28-204ENST00000602140 LMBRD1Q9NUN5 540 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 PNMA8BQ9ULN7 279 aaPredicted RBP13.32□□□□□ -0.28
RPS28-204ENST00000602140 MFHAS1Q9Y4C4 1052 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 KALRNO60229 2985 aa13.32□□□□□ -0.28
RPS28-204ENST00000602140 TCRBV5S1A1TA0A578 114 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 EME2A4GXA9 379 aaPredicted RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 ANKRD62A6NC57 917 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 TK2O00142 265 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 MUSKO15146 869 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 ATXN7O15265 892 aaPredicted RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 INSIG1O15503 277 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 DXOO77932 396 aaKnown RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 EIF4A3P38919 411 aaKnown RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 ZNF143P52747 638 aaPredicted RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 ADKP55263 362 aaKnown RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 RPL7AP62424 266 aaKnown RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 YPEL5P62699 121 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 SERINC3Q13530 473 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 PARP15Q460N3 678 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 FAXCQ5TGI0 409 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 CRTC1Q6UUV9 634 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 TP53I13Q8NBR0 393 aaPredicted RBP13.31□□□□□ -0.28
RPS28-204ENST00000602140 EXOC2Q96KP1 924 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 MCEEQ96PE7 176 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 EPAS1Q99814 870 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 AGPAT1Q99943 283 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 LRRC61Q9BV99 259 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 BOCQ9BWV1 1114 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 SLC13A1Q9BZW2 595 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 CATSPERBQ9H7T0 1116 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 DKK3Q9UBP4 350 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 FZD10Q9ULW2 581 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 SHROOM3Q8TF72 1996 aa13.31□□□□□ -0.28
RPS28-204ENST00000602140 TEX51A0A1B0GUA7 166 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 LGALS16A8MUM7 142 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 WASH4PA8MWX3 477 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 LMO7DNF2Z398 122 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 LZTS3O60299 673 aaPredicted RBP13.3□□□□□ -0.28
RPS28-204ENST00000602140 PIGNO95427 931 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 ANXA6P08133 673 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 TSHRP16473 764 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 XPAP23025 273 aaPredicted RBP13.3□□□□□ -0.28
RPS28-204ENST00000602140 RPIAP49247 311 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 ERVPABLB-1P60509 514 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 UBXN1Q04323 297 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 C19orf57Q0VDD7 668 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 CYTH1Q15438 398 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 C3orf38Q5JPI3 329 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 C6orf132Q5T0Z8 1188 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 MACC1Q6ZN28 852 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 SLC35F3Q8IY50 421 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 UMODL1-AS1Q8N2C9 162 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 ANKRD20A12PQ8NF67 263 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 TPCN2Q8NHX9 752 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 GLMNQ92990 594 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 ATXN7L3BQ96GX2 97 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 TBATAQ96M53 351 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 CNPY3Q9BT09 278 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 CPEB1Q9BZB8 566 aaKnown RBP13.3□□□□□ -0.28
RPS28-204ENST00000602140 CLPBQ9H078 707 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 ASCL3Q9NQ33 180 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms