RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	MEA1	Q16626	185 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	LRRC73	Q5JTD7	316 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	OGFOD3	Q6PK18	319 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	TFAP2D	Q7Z6R9	452 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	ARHGEF19	Q8IW93	802 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	PPM1K	Q8N3J5	372 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	OR6K2	Q8NGY2	324 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	SCG3	Q8WXD2	468 aa	Known RBP	11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	ABHD17A	Q96GS6	310 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	KREMEN1	Q96MU8	473 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	NT5C1B	Q96P26	610 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	MED15	Q96RN5	788 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	SIK2	Q9H0K1	926 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	CDH19	Q9H159	772 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	ZDHHC6	Q9H6R6	413 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	PIGV	Q9NUD9	493 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	MPP6	Q9NZW5	540 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	CNTN6	Q9UQ52	1028 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	FCF1	Q9Y324	198 aa	Known RBP	11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	PCDHGA3	Q9Y5H0	932 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	APC	P25054	2843 aa		11.19	□□□□□ -0.62
NUP62-222	ENST00000600935	IGLV3-10	A0A075B6K4	115 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	NEMP1	O14524	444 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	TOR1B	O14657	336 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	NKX2-8	O15522	239 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	MMP20	O60882	483 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	GRAP2	O75791	330 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	PNLIP	P16233	465 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	TFE3	P19532	575 aa	Predicted RBP	11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	ITIH2	P19823	946 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	FMO5	P49326	533 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	ATP1A2	P50993	1020 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	BLK	P51451	505 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	DNA2	P51530	1060 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	PMS1	P54277	932 aa	Known RBP	11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	MLLT10	P55197	1068 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	B4GALNT1	Q00973	533 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	NME3	Q13232	169 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	PDCL	Q13371	301 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	ARHGAP44	Q17R89	818 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	ZNF805	Q5CZA5	627 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	PHF19	Q5T6S3	580 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	RRAGA	Q7L523	313 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	GKN2	Q86XP6	184 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	RCBTB1	Q8NDN9	531 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	PDXP	Q96GD0	296 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	CATSPER2	Q96P56	530 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	CPXM1	Q96SM3	734 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.18	□□□□□ -0.62	1e-9	■■■■■ 33.5
NUP62-222	ENST00000600935	TM6SF2	Q9BZW4	377 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	RDH14	Q9HBH5	336 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	METTL14	Q9HCE5	456 aa	Known RBP	11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	ACP6	Q9NPH0	428 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	TMPRSS4	Q9NRS4	437 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	ARHGEF38	Q9NXL2	777 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	HECA	Q9UBI9	543 aa	Predicted RBP	11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	USP25	Q9UHP3	1055 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	RCOR1	Q9UKL0	485 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	PDZD2	O15018	2839 aa		11.18	□□□□□ -0.62
NUP62-222	ENST00000600935	ITPR3	Q14573	2671 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	NF1	P21359	2839 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	ILVBL	A1L0T0	632 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	PRR19	A6NJB7	356 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	ZNF891	A8MT65	544 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP62-222	ENST00000600935		K7EM74	188 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	PMM2	O15305	246 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	B4GAT1	O43505	415 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	KRT38	O76015	456 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	RASGRP1	O95267	797 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	GLI1	P08151	1106 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	KRT7	P08729	469 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	CTSE	P14091	401 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	CMA1	P23946	247 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	PEX5	P50542	639 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	SRP54	P61011	504 aa	Known RBP	11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	GCNT1	Q02742	428 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	KLHL40	Q2TBA0	621 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	WSCD2	Q2TBF2	565 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	TMEM164	Q5U3C3	297 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	RETSAT	Q6NUM9	610 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	RD3	Q7Z3Z2	195 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	PLPP6	Q8IY26	295 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	WDTC1	Q8N5D0	677 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	IL22RA1	Q8N6P7	574 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	SPATA20	Q8TB22	786 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	GPBAR1	Q8TDU6	330 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	FUBP1	Q96AE4	644 aa	Known RBP	11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	SLC45A3	Q96JT2	553 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	TAAR9	Q96RI9	348 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	NUDT22	Q9BRQ3	303 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	ASNSD1	Q9NWL6	643 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	LRIT1	Q9P2V4	623 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	B3GALT1	Q9Y5Z6	326 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	SHANK1	Q9Y566	2161 aa		11.17	□□□□□ -0.62
NUP62-222	ENST00000600935	IGHV5-10-1	A0A0J9YXX1	117 aa		11.16	□□□□□ -0.62
NUP62-222	ENST00000600935	FAM237A	A0A1B0GTK4	181 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms