RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FUT11Q495W5 492 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 CES5AQ6NT32 575 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 CHRDL2Q6WN34 429 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 KIAA0907Q7Z7F0 614 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 E2F7Q96AV8 911 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 NSMCE3Q96MG7 304 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 THG1LQ9NWX6 298 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 FBXO10Q9UK96 956 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 HEPACAM2A8MVW5 462 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 FOXO6A8MYZ6 492 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 K7ERQ8 282 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 HOXC11O43248 304 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 KRT37O76014 449 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 CYP17A1P05093 508 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 SNRPAP09012 282 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 ERVK-10P10266 1014 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 CA4P22748 312 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 AP1S1P61966 158 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 PDPK2PQ6A1A2 396 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 NLRP9Q7RTR0 991 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 RASSF3Q86WH2 238 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 RNF135Q8IUD6 432 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 MZB1Q8WU39 189 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 ZNF778Q96MU6 729 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 SELENOSQ9BQE4 189 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 TDRD1Q9BXT4 1180 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 S1PR5Q9H228 398 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 TRABDQ9H4I3 376 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 C20orf96Q9NUD7 363 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 CLEC1BQ9P126 229 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 ZFATQ9P243 1243 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 HS3ST2Q9Y278 367 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 RRP15Q9Y3B9 282 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 RAI2Q9Y5P3 530 aa17.81■□□□□ 0.44
SHKBP1-224ENST00000600718 SMAD6O43541 496 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 FAM155BO75949 473 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 KRT38O76015 456 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 PAPSS2O95340 614 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 NFATC1O95644 943 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 ADH5P11766 374 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 BRAFP15056 766 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 PAMP19021 973 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 CNTFP26441 200 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 MAPK8P45983 427 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 SEPT6Q14141 434 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 ISG20Q96AZ6 181 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 MTBPQ96DY7 904 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 CAPS2Q9BXY5 557 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 ZFP14Q9HCL3 533 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 TREX1Q9NSU2 369 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 CDH22Q9UJ99 828 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 SLC25A13Q9UJS0 675 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 CHKBQ9Y259 395 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 C2orf16Q68DN1 1984 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 UGT1A9O60656 530 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 MDH1P40925 334 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 TSTD2Q5T7W7 516 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 ESRP1Q6NXG1 681 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 KCNMB4Q86W47 210 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 AHI1Q8N157 1196 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 NAT16Q8N8M0 369 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 ATP2A3Q93084 1043 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 SMC6Q96SB8 1091 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 ADGRE3Q9BY15 652 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 UGT1A7Q9HAW7 530 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 UGT1A10Q9HAW8 530 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 UGT1A8Q9HAW9 530 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
SHKBP1-224ENST00000600718 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 A0A1W2PPM1 405 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 MROH6A6NGR9 719 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 PRLP01236 227 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 MT-ND3P03897 115 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 SRCP12931 536 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 CREB1P16220 341 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 FCARP24071 287 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 GBP2P32456 591 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 CTSOP43234 321 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 ECT2LQ008S8 904 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 GALNT3Q14435 633 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 PDGFRLQ15198 375 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 ATXN7L2Q5T6C5 722 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 TEDDM1Q5T9Z0 273 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 TRIM68Q6AZZ1 485 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 PACS1Q6VY07 963 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 ADIPOR2Q86V24 386 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 BRSK1Q8TDC3 778 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 RIPOR3Q96MK2 946 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 CPNE1Q99829 537 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 CEP44Q9C0F1 390 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 KCNK9Q9NPC2 374 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 TXNDC16Q9P2K2 825 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 IGSF6O95976 241 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 POLR2EP19388 210 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 CTC1Q2NKJ3 1217 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 HSP90AA5PQ58FG0 334 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 GRTP1Q5TC63 336 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 KIAA0930Q6ICG6 404 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 TANGO2Q6ICL3 276 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms