RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ASCL3Q9NQ33 180 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 LHX3Q9UBR4 397 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 APOBEC3BQ9UH17 382 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 TCRBV5S1A1TA0A578 114 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 MUSKO15146 869 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 CREB3O43889 395 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 KRT3P12035 628 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 NSFP46459 744 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 DUSP3P51452 185 aaPredicted RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 THOP1P52888 689 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 GSCP56915 257 aaPredicted RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 GEMIN4P57678 1058 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 RHOAP61586 193 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 RPL7AP62424 266 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 IRF4Q15306 451 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 SYCP1Q15431 976 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 CLEC16AQ2KHT3 1053 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 KLHL40Q2TBA0 621 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 PRRT3Q5FWE3 981 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 SCYL2Q6P3W7 929 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 TRIM72Q6ZMU5 477 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 MON1BQ7L1V2 547 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 GPR155Q7Z3F1 870 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 TTC7BQ86TV6 843 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 RTL3Q8N8U3 475 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZNF248Q8NDW4 579 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 ENOX1Q8TC92 643 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 HIC2Q96JB3 615 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 VCPIP1Q96JH7 1222 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 GDAP1L1Q96MZ0 367 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 MCEEQ96PE7 176 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 EPAS1Q99814 870 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 OSBPL1AQ9BXW6 950 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 TTYH3Q9C0H2 523 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 CLPBQ9H078 707 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 ABCG4Q9H172 646 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 LMBRD1Q9NUN5 540 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 SEPT11Q9NVA2 429 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 TMEM51Q9NW97 253 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 GPATCH2LQ9NWQ4 482 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 ADAM22Q9P0K1 906 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 HPCAL4Q9UM19 191 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 ENTPD2Q9Y5L3 495 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 CSNK1G3Q9Y6M4 447 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 KALRNO60229 2985 aa12.25□□□□□ -0.45
SOX2-OT-228ENST00000597828 EME2A4GXA9 379 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 RASA4BC9J798 803 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 RASA4O43374 803 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 TM7SF2O76062 418 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 POP4O95707 220 aaKnown RBP12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 IGSF6O95976 241 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 PRKCGP05129 697 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 TIMP2P16035 220 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 EPHB2P29323 1055 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 STAT1P42224 750 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 PDX1P52945 283 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 COPB1P53618 953 aaKnown RBP12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 ADKP55263 362 aaKnown RBP12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 OGDHQ02218 1023 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 NR0B2Q15466 257 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 KCTD16Q68DU8 428 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 FOXR1Q6PIV2 292 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 SLFN11Q7Z7L1 901 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZSWIM9Q86XI8 627 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 PHF13Q86YI8 300 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 C3orf20Q8ND61 904 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 CXorf40AQ8TE69 158 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 ASB12Q8WXK4 309 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 PCMTD1Q96MG8 357 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZNF578Q96N58 590 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 IL12RB2Q99665 862 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 BOCQ9BWV1 1114 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 SYNDIG1Q9H7V2 258 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 POLR1BQ9H9Y6 1135 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 USP29Q9HBJ7 922 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 FZD10Q9ULW2 581 aa12.24□□□□□ -0.45
SOX2-OT-228ENST00000597828 HELZ2Q9BYK8 2649 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 CXorf51AA0A1B0GTR3 108 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 TEX51A0A1B0GUA7 166 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 LZTS3O60299 673 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 DXOO77932 396 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 TSHRP16473 764 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 EIF4A3P38919 411 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 RGRP47804 291 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 LSSP48449 732 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 CYTH1Q15438 398 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 EFHC2Q5JST6 749 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 FKBP15Q5T1M5 1219 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 ARHGAP40Q5TG30 622 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 FAXCQ5TGI0 409 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 DNAJC24Q6P3W2 148 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 MACC1Q6ZN28 852 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZSCAN30Q86W11 494 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 DNAAF5Q86Y56 855 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 KYQ8NBH2 561 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 KCNE4Q8WWG9 221 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 TSACCQ96A04 125 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms