RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 RFC1P35251 1148 aaPredicted RBP16.13■□□□□ 0.17
LINC02560-201ENST00000596379 SOX5P35711 763 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 IGFALSP35858 605 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 TMPRSS3P57727 454 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 POLR2FP61218 127 aaKnown RBP16.13■□□□□ 0.17
LINC02560-201ENST00000596379 YPEL5P62699 121 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 RAD51Q06609 339 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 ARHGAP40Q5TG30 622 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 FAXCQ5TGI0 409 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 PHACTR4Q8IZ21 702 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 CXorf40AQ8TE69 158 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 GRAMD1AQ96CP6 724 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 PCDHB18PQ96TA0 734 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 TTYH3Q9C0H2 523 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 NOL6Q9H6R4 1146 aaKnown RBP16.13■□□□□ 0.17
LINC02560-201ENST00000596379 NLRC4Q9NPP4 1024 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 MBNL1Q9NR56 388 aaKnown RBP16.13■□□□□ 0.17
LINC02560-201ENST00000596379 THSD1Q9NS62 852 aa16.13■□□□□ 0.17
LINC02560-201ENST00000596379 ZSCAN5CA6NGD5 496 aaPredicted RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 LMO7DNF2Z398 122 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 ERVH48-1M5A8F1 160 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 CASC3O15234 703 aaKnown RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 YY2O15391 372 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 ANXA6P08133 673 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 UNGP13051 313 aaPredicted RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 TIMP2P16035 220 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 EIF4A3P38919 411 aaKnown RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 RPIAP49247 311 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 UCNP55089 124 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 JAM2P57087 298 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 CFHR1Q03591 330 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 PTP4A2Q12974 167 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 TAF1BQ53T94 588 aaPredicted RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 C6orf132Q5T0Z8 1188 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 WDR59Q6PJI9 974 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 IGF2-ASQ6U949 168 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 TRIM72Q6ZMU5 477 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 RBM44Q6ZP01 1051 aaKnown RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 SLFN11Q7Z7L1 901 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 ZNF605Q86T29 641 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 SLC35F3Q8IY50 421 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 PYROXD2Q8N2H3 581 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 GLMNQ92990 594 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 NTAN1Q96AB6 310 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 GDAP1L1Q96MZ0 367 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 SLC46A1Q96NT5 459 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 WRAP53Q9BUR4 548 aaKnown RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 LRRC61Q9BV99 259 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 DPH1Q9BZG8 443 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 SLC13A1Q9BZW2 595 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 CLPBQ9H078 707 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 KLC2Q9H0B6 622 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 NUP62CLQ9H1M0 184 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 FAM207AQ9NSI2 230 aaPredicted RBP16.12■□□□□ 0.17
LINC02560-201ENST00000596379 ADAM22Q9P0K1 906 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 LRRK1Q38SD2 2015 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 MGAQ8IWI9 3026 aa16.12■□□□□ 0.17
LINC02560-201ENST00000596379 EPHB6O15197 1021 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 INSIG1O15503 277 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 TSHRP16473 764 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 GPD1P21695 349 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 EPHB2P29323 1055 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 RHOAP61586 193 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 PPARDQ03181 441 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 INO80DQ53TQ3 878 aaPredicted RBP16.11■□□□□ 0.17
LINC02560-201ENST00000596379 CT47A1Q5JQC4 288 aaPredicted RBP16.11■□□□□ 0.17
LINC02560-201ENST00000596379 FOXR1Q6PIV2 292 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 RTL3Q8N8U3 475 aaKnown RBP16.11■□□□□ 0.17
LINC02560-201ENST00000596379 TP53I13Q8NBR0 393 aaPredicted RBP16.11■□□□□ 0.17
LINC02560-201ENST00000596379 CASKIN2Q8WXE0 1202 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 PRR11Q96HE9 360 aaPredicted RBP16.11■□□□□ 0.17
LINC02560-201ENST00000596379 TBATAQ96M53 351 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 EPAS1Q99814 870 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 SELENOOQ9BVL4 669 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 C1QTNF7Q9BXJ2 289 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 DKK3Q9UBP4 350 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 PADI4Q9UM07 663 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 MFHAS1Q9Y4C4 1052 aa16.11■□□□□ 0.17
LINC02560-201ENST00000596379 PMS2P1A4D2B8 440 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 RASA4BC9J798 803 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 TOR1BO14657 336 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 RASA4O43374 803 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 TCEA3O75764 348 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 IGSF6O95976 241 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 PLA2G2AP14555 144 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 STAT1P42224 750 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
LINC02560-201ENST00000596379 RHDQ02161 417 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 KRT31Q15323 416 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 TMEM52BQ4KMG9 183 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 ESRP1Q6NXG1 681 aaKnown RBP16.1■□□□□ 0.17
LINC02560-201ENST00000596379 SCYL2Q6P3W7 929 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 MACC1Q6ZN28 852 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 ENOX1Q8TC92 643 aaKnown RBP16.1■□□□□ 0.17
LINC02560-201ENST00000596379 NAT6Q93015 286 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 HMCESQ96FZ2 354 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 CCDC3Q9BQI4 270 aa16.1■□□□□ 0.17
LINC02560-201ENST00000596379 CPEB1Q9BZB8 566 aaKnown RBP16.1■□□□□ 0.17
LINC02560-201ENST00000596379 GULP1Q9UBP9 304 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms