RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 EPHB2P29323 1055 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 RABIFP47224 123 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 COL28A1Q2UY09 1125 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 CCDC122Q5T0U0 273 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 DCUN1D2Q6PH85 259 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 Q6ZSR6 202 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 PARGQ86W56 976 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 BMFQ96LC9 184 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 GDAP1L1Q96MZ0 367 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 CNPY3Q9BT09 278 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 C1QTNF2Q9BXJ5 285 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 NRSN2Q9GZP1 204 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 NOL6Q9H6R4 1146 aaKnown RBP18.16■□□□□ 0.5
HOMER3-208ENST00000595756 NHEJ1Q9H9Q4 299 aaPredicted RBP18.16■□□□□ 0.5
HOMER3-208ENST00000595756 FZD10Q9ULW2 581 aa18.16■□□□□ 0.5
HOMER3-208ENST00000595756 URB1O60287 2271 aaKnown RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 SPTY2D1-AS1A0A0U1RR47 76 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 POM121BA6NF01 834 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 WASH4PA8MWX3 477 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 KRIT1O00522 736 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 FPGTO14772 594 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 RAD51BO15315 384 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 FGF10O15520 208 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 SPINT1O43278 529 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 POP4O95707 220 aaKnown RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 IGSF6O95976 241 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 PAK4O96013 591 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 GIMD1P0DJR0 217 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 NME1P15531 152 aaKnown RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 GKP32189 559 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 HTR7P34969 479 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 YBEYP58557 167 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 HNRNPKP61978 463 aaKnown RBP eCLIP18.15■□□□□ 0.57e-10■■■□□ 18.2
HOMER3-208ENST00000595756 RPL7AP62424 266 aaKnown RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 DAB2P98082 770 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 INSM1Q01101 510 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 TARDBPQ13148 414 aaKnown RBP eCLIP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 PARP15Q460N3 678 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 INO80DQ53TQ3 878 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 PLEKHA7Q6IQ23 1121 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 C19orf48Q6RUI8 117 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 PYROXD2Q8N2H3 581 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 ZNF653Q96CK0 615 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 KLF6Q99612 283 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 CATSPERBQ9H7T0 1116 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 GRPEL1Q9HAV7 217 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 USP29Q9HBJ7 922 aa18.15■□□□□ 0.5
HOMER3-208ENST00000595756 CNOT8Q9UFF9 292 aaKnown RBP18.15■□□□□ 0.5
HOMER3-208ENST00000595756 NEMP2A6NFY4 417 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 H3BM21 787 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 AREL1O15033 823 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 FFAR2O15552 330 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 BUB1O43683 1085 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 CSF2P04141 144 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 CKMT1AP12532 417 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 E2F1Q01094 437 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 SGCGQ13326 291 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 FZD2Q14332 565 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 RTP5Q14D33 572 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 ASTE1Q2TB18 679 aaPredicted RBP18.14■□□□□ 0.49
HOMER3-208ENST00000595756 MYLK3Q32MK0 819 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 ATXN7L2Q5T6C5 722 aaPredicted RBP18.14■□□□□ 0.49
HOMER3-208ENST00000595756 SCYL2Q6P3W7 929 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 GDPD4Q6W3E5 623 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 LEKR1Q6ZMV7 388 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 PDZD3Q86UT5 571 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 ZNF354CQ86Y25 554 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 CCDC170Q8IYT3 715 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 DCBLD1Q8N8Z6 715 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 FAM181AQ8N9Y4 354 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 ZNF548Q8NEK5 533 aaPredicted RBP18.14■□□□□ 0.49
HOMER3-208ENST00000595756 KLHL32Q96NJ5 620 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 DUSP23Q9BVJ7 150 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 DNAJC28Q9NX36 388 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 GGT7Q9UJ14 662 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 CLCA2Q9UQC9 943 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 ITM2BQ9Y287 266 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 MFHAS1Q9Y4C4 1052 aa18.14■□□□□ 0.49
HOMER3-208ENST00000595756 IGLON5A6NGN9 336 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 NEMP1O14524 444 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 RIOK3O14730 519 aaKnown RBP18.13■□□□□ 0.49
HOMER3-208ENST00000595756 SCAMP1O15126 338 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 CREB3O43889 395 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 GP1BAP07359 652 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 PFN3P60673 137 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 RAD51Q06609 339 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 MAMLD1Q13495 774 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 SERINC3Q13530 473 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 TMTC1Q8IUR5 882 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 UMODL1-AS1Q8N2C9 162 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 HMCESQ96FZ2 354 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 CHP1Q99653 195 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 NCAPGQ9BPX3 1015 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 EVA1BQ9NVM1 165 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 DONSONQ9NYP3 566 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 DKK3Q9UBP4 350 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 LRRK1Q38SD2 2015 aa18.13■□□□□ 0.49
HOMER3-208ENST00000595756 COL27A1Q8IZC6 1860 aaPredicted RBP18.12■□□□□ 0.49
HOMER3-208ENST00000595756 RASA4BC9J798 803 aa18.12■□□□□ 0.49
HOMER3-208ENST00000595756 RASA4O43374 803 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms