RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 EPN1Q9Y6I3 576 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 IGF2RP11717 2491 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 H0Y8X5 98 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 SLC31A1O15431 190 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 PCDH8O95206 1070 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 CER1O95813 267 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF883P0CG24 379 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 TIMP2P16035 220 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 CR2P20023 1033 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 CSRP1P21291 193 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 COMTP21964 271 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 SERPINB6P35237 376 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 CYLC1P35663 651 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 NUDT1P36639 197 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 NXPH1P58417 271 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 GBE1Q04446 702 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 NSUN2Q08J23 767 aaKnown RBP eCLIP11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 CCDC15Q0P6D6 951 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 GALNT2Q10471 571 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 SLC14A1Q13336 389 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 SHBQ15464 509 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF423Q2M1K9 1284 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 KIAA1161Q6NSJ0 714 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 PSAPL1Q6NUJ1 521 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 IL27RAQ6UWB1 636 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 GCNT7Q6ZNI0 430 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 ADAT2Q7Z6V5 191 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 SPATS2Q86XZ4 545 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 CAMK1DQ8IU85 385 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 TMTC1Q8IUR5 882 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 ATPAF2Q8N5M1 289 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 PLD5Q8N7P1 536 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 DEFB124Q8NES8 71 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 RAB7BQ96AH8 199 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 CAMK1GQ96NX5 476 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 RNF157Q96PX1 679 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 MYOCQ99972 504 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 SUV39H2Q9H5I1 410 aa11.11□□□□□ -0.63
SHKBP1-206ENST00000595523 A0A0A6YYK5 440 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 LRRD1A4D1F6 860 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF487B1APH4 448 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 PRAMEF26H0Y7S4 382 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 TLR4O00206 839 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 RAD51BO15315 384 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 TSPAN6O43657 245 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 SH3BP5O60239 455 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 SLC1A1P43005 524 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 MARCKSL1P49006 195 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 NOVA1P51513 510 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 C21orf59P57076 290 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 RPS21P63220 83 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 FAM193AP78312 1265 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 RAD51Q06609 339 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 PRAMEF14Q5SWL7 426 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 SLC9A4Q6AI14 798 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 KDM7AQ6ZMT4 941 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 DBX2Q6ZNG2 339 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 IQCHQ86VS3 1027 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 VSIG1Q86XK7 387 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 MFSD2AQ8NA29 543 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 SPC24Q8NBT2 197 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 ECHDC3Q96DC8 303 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF641Q96N77 438 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 TUBGCP5Q96RT8 1024 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 KLF6Q99612 283 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 MGME1Q9BQP7 344 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 C1QTNF2Q9BXJ5 285 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 SLC17A9Q9BYT1 436 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 TM7SF3Q9NS93 570 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 DTLQ9NZJ0 730 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 BTBD3Q9Y2F9 522 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 ALG6Q9Y672 507 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 DUSP10Q9Y6W6 482 aa11.1□□□□□ -0.63
SHKBP1-206ENST00000595523 PLXNB3Q9ULL4 1909 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 A0A0U1RQJ8 604 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 A0A1B0GTQ1 180 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 IGLON5A6NGN9 336 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 CBFA2T3O75081 653 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 PAK4O96013 591 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 KRT1P04264 644 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 PRKCGP05129 697 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 ADRB1P08588 477 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 CEACAM1P13688 526 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 KCNA4P22459 653 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 HNRNPA2B1P22626 353 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 NOP2P46087 812 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 SCNN1BP51168 640 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 RENBPP51606 427 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 CLDN2P57739 230 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 MAXP61244 160 aa11.09□□□□□ -0.63
SHKBP1-206ENST00000595523 IL9RQ01113 521 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms